Difference between revisions of "Hdceap"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/I4FE4SR I4FE4SR] == * direction: ** LEFT-TO-RIGHT * common name: ** ISC [4Fe-4S] Reduction * Synony...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052] == * common_name: ** Galactose metabolism * Synonym(s): == Reaction(s) found == '...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/I4FE4SR I4FE4SR] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Galactose metabolism
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* common name:
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** ISC [4Fe-4S] Reduction
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''17''' reactions found over '''67''' reactions in the full pathway
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** 1.0 [[iscu_2fe2s2]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[fadh2]][c] '''=>''' 1.0 [[fad]][c] '''+''' 1.0 [[iscu_4fe4s]][c]
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* [[AGDC]]
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* With common name(s):
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** 2 associated gene(s):
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** 1.0 IscU with two bound [2Fe-2S] clusters[c] '''+''' 2.0 H+[c] '''+''' 1.0 Flavin adenine dinucleotide reduced[c] '''=>''' 1.0 Flavin adenine dinucleotide oxidized[c] '''+''' 1.0 IscU with bound [4Fe-4S] cluster[c]
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*** [[EF3044]]
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*** [[EF1317]]
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== Genes associated with this reaction  ==
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** 3 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[EF2391]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-l_plantarum_wcfs1]]
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== Pathways  ==
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* [[DDPGALA]]
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== Reconstruction information  ==
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** 2 associated gene(s):
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* [[orthology]]:
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*** [[EF2266]]
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** [[pantograph]]:
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*** [[EF0423]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[EDA]]
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** 3 associated gene(s):
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*** [[EF2266]]
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*** [[EF0423]]
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*** [[EF3134]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[FFSD]]
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** 1 associated gene(s):
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*** [[EF1603]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[GALKr]]
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** 1 associated gene(s):
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*** [[EF1069]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[GALT]]
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** 1 associated gene(s):
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*** [[EF1071]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[GALUi]]
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** 1 associated gene(s):
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*** [[EF1746]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[HEX1]]
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** 1 associated gene(s):
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*** [[EF2788]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[LACZ]]
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** 1 associated gene(s):
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*** [[EF1238]]
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** 1 reconstruction source(s) associated:
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*** [[manual-2_reaction_to_add_delete]]
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* [[MLTG1]]
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** 2 associated gene(s):
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*** [[EF1347]]
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*** [[EF1348]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[PFK]]
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** 4 associated gene(s):
 +
*** [[EF1045]]
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*** [[EF1806]]
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*** [[EF0718]]
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*** [[EF0693]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[PFK_2]]
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** 1 associated gene(s):
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*** [[EF1045]]
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** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[PFK_3]]
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** 1 associated gene(s):
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*** [[EF1045]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[RAFH]]
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** 1 associated gene(s):
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*** [[EF1603]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[SUCR]]
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** 2 associated gene(s):
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*** [[EF1602]]
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*** [[EF1348]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[UDPG4E]]
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** 4 associated gene(s):
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*** [[EF2783]]
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*** [[EF2165]]
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*** [[EF1070]]
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*** [[EF0646]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[UDPGALM]]
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** 1 associated gene(s):
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*** [[EF2487]]
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** 2 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-l_plantarum_wcfs1]]
 +
== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/AGMIS AGMIS]
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* [http://bigg.ucsd.edu/universal/reactions/ALCD22_L ALCD22_L]
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* [http://bigg.ucsd.edu/universal/reactions/ARABR ARABR]
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* [http://bigg.ucsd.edu/universal/reactions/BFFS BFFS]
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* [http://bigg.ucsd.edu/universal/reactions/DDGALK DDGALK]
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* [http://bigg.ucsd.edu/universal/reactions/EMGH EMGH]
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* [http://bigg.ucsd.edu/universal/reactions/EPMGH EPMGH]
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* [http://bigg.ucsd.edu/universal/reactions/G6PP G6PP]
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* [http://bigg.ucsd.edu/universal/reactions/G6PPer G6PPer]
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* [http://bigg.ucsd.edu/universal/reactions/GALCTND GALCTND]
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* [http://bigg.ucsd.edu/universal/reactions/GALIGH GALIGH]
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* [http://bigg.ucsd.edu/universal/reactions/GALKh GALKh]
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* [http://bigg.ucsd.edu/universal/reactions/GALM2 GALM2]
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* [http://bigg.ucsd.edu/universal/reactions/GALM2pp GALM2pp]
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* [http://bigg.ucsd.edu/universal/reactions/GALO GALO]
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* [http://bigg.ucsd.edu/universal/reactions/GALOR GALOR]
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* [http://bigg.ucsd.edu/universal/reactions/GALS3 GALS3]
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* [http://bigg.ucsd.edu/universal/reactions/GGGH GGGH]
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* [http://bigg.ucsd.edu/universal/reactions/GGLGH GGLGH]
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* [http://bigg.ucsd.edu/universal/reactions/GLNLASEer GLNLASEer]
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* [http://bigg.ucsd.edu/universal/reactions/GLTPD GLTPD]
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* [http://bigg.ucsd.edu/universal/reactions/GLUKA GLUKA]
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* [http://bigg.ucsd.edu/universal/reactions/GLUKAh GLUKAh]
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* [http://bigg.ucsd.edu/universal/reactions/GRGT GRGT]
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* [http://bigg.ucsd.edu/universal/reactions/GalMr GalMr]
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* [http://bigg.ucsd.edu/universal/reactions/IAGT IAGT]
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* [http://bigg.ucsd.edu/universal/reactions/LACZe LACZe]
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* [http://bigg.ucsd.edu/universal/reactions/LACZly LACZly]
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* [http://bigg.ucsd.edu/universal/reactions/LACZpp LACZpp]
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* [http://bigg.ucsd.edu/universal/reactions/LCGH LCGH]
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* [http://bigg.ucsd.edu/universal/reactions/MELTGH MELTGH]
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* [http://bigg.ucsd.edu/universal/reactions/MGHB MGHB]
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* [http://bigg.ucsd.edu/universal/reactions/MLGH MLGH]
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* [http://bigg.ucsd.edu/universal/reactions/MLTG1e MLTG1e]
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* [http://bigg.ucsd.edu/universal/reactions/MLTG1ly MLTG1ly]
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* [http://bigg.ucsd.edu/universal/reactions/MTGH MTGH]
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* [http://bigg.ucsd.edu/universal/reactions/OAGMIG OAGMIG]
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* [http://bigg.ucsd.edu/universal/reactions/PFKh PFKh]
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* [http://bigg.ucsd.edu/universal/reactions/PGCM PGCM]
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* [http://bigg.ucsd.edu/universal/reactions/PGMTh PGMTh]
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* [http://bigg.ucsd.edu/universal/reactions/RAFGH RAFGH]
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* [http://bigg.ucsd.edu/universal/reactions/RAFHpp RAFHpp]
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* [http://bigg.ucsd.edu/universal/reactions/RGH RGH]
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* [http://bigg.ucsd.edu/universal/reactions/SBTRh SBTRh]
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* [http://bigg.ucsd.edu/universal/reactions/STACHGALACT STACHGALACT]
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* [http://bigg.ucsd.edu/universal/reactions/SUCRe SUCRe]
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* [http://bigg.ucsd.edu/universal/reactions/SYGH SYGH]
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* [http://bigg.ucsd.edu/universal/reactions/TGBPA TGBPA]
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* [http://bigg.ucsd.edu/universal/reactions/UGALGTg UGALGTg]
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* [http://bigg.ucsd.edu/universal/reactions/UGLT UGLT]
 
== External links  ==
 
== External links  ==
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* MetaNetX (MNX) Equation : MNXR100770
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{{#set: common_name=Galactose metabolism}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=17}}
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{{#set: common name=ISC [4Fe-4S] Reduction}}
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{{#set: total reaction=67}}
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{{#set: gene associated=EF2391}}
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{{#set: completion rate=25.0}}
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{{#set: in pathway=}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
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Revision as of 18:27, 18 March 2018

Pathway map00052

  • common_name:
    • Galactose metabolism
  • Synonym(s):

Reaction(s) found

17 reactions found over 67 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=Hdceap&oldid=7313"