Difference between revisions of "Aspsa"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3OAS100 3OAS100] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-protein...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770] == * common_name: ** Pantothenate and CoA biosynthesis * Synonym(s): == Reaction(s...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/3OAS100 3OAS100] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Pantothenate and CoA biosynthesis
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* common name:
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** 3-oxoacyl-[acyl-carrier-protein] synthase (n-C10:0)
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''17''' reactions found over '''75''' reactions in the full pathway
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** 1.0 [[ocACP]][c] '''+''' 1.0 [[malACP]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[ACP]][c] '''+''' 1.0 [[3odecACP]][c]
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* [[ACHBS]]
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* With common name(s):
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** 1 associated gene(s):
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** 1.0 Octanoyl-ACP (n-C8:0ACP)[c] '''+''' 1.0 Malonyl-[acyl-carrier protein][c] '''+''' 1.0 H+[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 Acyl carrier protein[c] '''+''' 1.0 3-Oxodecanoyl-[acyl-carrier protein][c]
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*** [[EF1213]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-l_plantarum_wcfs1]]
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* [[EF2880]]
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* [[ACLS]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** 1 associated gene(s):
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* [[EF0283]]
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*** [[EF1213]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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*** [[orthology-l_plantarum_wcfs1]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[ACPS1]]
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* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
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** 2 associated gene(s):
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** '''36''' reactions found over '''182''' reactions in the full pathway
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*** [[EF0848]]
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* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
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*** [[EF3111]]
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** '''65''' reactions found over '''160''' reactions in the full pathway
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** 3 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[orthology]]:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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** [[pantograph]]:
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*** [[orthology-l_plantarum_wcfs1]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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* [[APNPT]]
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** 1 associated gene(s):
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*** [[EF0168]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[ASP1DC]]
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** 1 associated gene(s):
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*** [[EF1858]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[DPCOAK]]
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** 1 associated gene(s):
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*** [[EF0880]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[DPR]]
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** 3 associated gene(s):
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*** [[EF0517]]
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*** [[EF1655]]
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*** [[EF2445]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[ILETA]]
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** 1 associated gene(s):
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*** [[EF1793]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[MOHMT]]
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** 1 associated gene(s):
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*** [[EF1860]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[NADDP]]
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** 1 associated gene(s):
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*** [[EF0722]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[PANTS]]
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** 1 associated gene(s):
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*** [[EF1859]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[PNTK]]
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** 1 associated gene(s):
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*** [[EF0168]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[PPCDC]]
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** 1 associated gene(s):
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*** [[EF2656]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[PPNCL]]
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** 1 associated gene(s):
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*** [[EF2656]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[PPNCL2]]
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** 1 associated gene(s):
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*** [[EF2656]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[PTPATi]]
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** 1 associated gene(s):
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*** [[EF2451]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[VALTA]]
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** 1 associated gene(s):
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*** [[EF1793]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/56DH5FLURAAMH 56DH5FLURAAMH]
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* [http://bigg.ucsd.edu/universal/reactions/5FLURAOR 5FLURAOR]
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* [http://bigg.ucsd.edu/universal/reactions/ACAS_2ahbut ACAS_2ahbut]
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* [http://bigg.ucsd.edu/universal/reactions/ACHBSm ACHBSm]
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* [http://bigg.ucsd.edu/universal/reactions/ACLSm ACLSm]
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* [http://bigg.ucsd.edu/universal/reactions/ACPS1_1 ACPS1_1]
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* [http://bigg.ucsd.edu/universal/reactions/ACPS1h ACPS1h]
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* [http://bigg.ucsd.edu/universal/reactions/ACPpds ACPpds]
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* [http://bigg.ucsd.edu/universal/reactions/AFLBURPPAAMH AFLBURPPAAMH]
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* [http://bigg.ucsd.edu/universal/reactions/APCPT APCPT]
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* [http://bigg.ucsd.edu/universal/reactions/APLh APLh]
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* [http://bigg.ucsd.edu/universal/reactions/APLm APLm]
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* [http://bigg.ucsd.edu/universal/reactions/APPAT APPAT]
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* [http://bigg.ucsd.edu/universal/reactions/BCTA_val_h BCTA_val_h]
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* [http://bigg.ucsd.edu/universal/reactions/BCTAh BCTAh]
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* [http://bigg.ucsd.edu/universal/reactions/BUPN BUPN]
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* [http://bigg.ucsd.edu/universal/reactions/DHAD1 DHAD1]
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* [http://bigg.ucsd.edu/universal/reactions/DHAD1m DHAD1m]
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* [http://bigg.ucsd.edu/universal/reactions/DHAD2 DHAD2]
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* [http://bigg.ucsd.edu/universal/reactions/DHAD2m DHAD2m]
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* [http://bigg.ucsd.edu/universal/reactions/DHAD_3mob_h DHAD_3mob_h]
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* [http://bigg.ucsd.edu/universal/reactions/DHADh DHADh]
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* [http://bigg.ucsd.edu/universal/reactions/DHPD DHPD]
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* [http://bigg.ucsd.edu/universal/reactions/DHPM1 DHPM1]
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* [http://bigg.ucsd.edu/universal/reactions/DHPM2 DHPM2]
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* [http://bigg.ucsd.edu/universal/reactions/DMORh DMORh]
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* [http://bigg.ucsd.edu/universal/reactions/DNADDP DNADDP]
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* [http://bigg.ucsd.edu/universal/reactions/DPCOAKm DPCOAKm]
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* [http://bigg.ucsd.edu/universal/reactions/DPCOAPP DPCOAPP]
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* [http://bigg.ucsd.edu/universal/reactions/DPRm DPRm]
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* [http://bigg.ucsd.edu/universal/reactions/DURAD DURAD]
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* [http://bigg.ucsd.edu/universal/reactions/DURAD2 DURAD2]
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* [http://bigg.ucsd.edu/universal/reactions/DURADx DURADx]
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* [http://bigg.ucsd.edu/universal/reactions/FADDP FADDP]
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* [http://bigg.ucsd.edu/universal/reactions/ILETAm ILETAm]
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* [http://bigg.ucsd.edu/universal/reactions/KARA1 KARA1]
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* [http://bigg.ucsd.edu/universal/reactions/KARA1im KARA1im]
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* [http://bigg.ucsd.edu/universal/reactions/KARA2 KARA2]
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* [http://bigg.ucsd.edu/universal/reactions/KARA2im KARA2im]
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* [http://bigg.ucsd.edu/universal/reactions/KARI_23dhmb KARI_23dhmb]
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* [http://bigg.ucsd.edu/universal/reactions/KARI_23dhmp KARI_23dhmp]
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* [http://bigg.ucsd.edu/universal/reactions/MTMOHT MTMOHT]
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* [http://bigg.ucsd.edu/universal/reactions/NADDPe NADDPe]
 +
* [http://bigg.ucsd.edu/universal/reactions/NADDPp NADDPp]
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* [http://bigg.ucsd.edu/universal/reactions/NPH NPH]
 +
* [http://bigg.ucsd.edu/universal/reactions/PBAL PBAL]
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* [http://bigg.ucsd.edu/universal/reactions/PBALm PBALm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PNCDC PNCDC]
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* [http://bigg.ucsd.edu/universal/reactions/PNORn PNORn]
 +
* [http://bigg.ucsd.edu/universal/reactions/PNTEH PNTEH]
 +
* [http://bigg.ucsd.edu/universal/reactions/PNTKm PNTKm]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPATDh PPATDh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPNCL3 PPNCL3]
 +
* [http://bigg.ucsd.edu/universal/reactions/PTPATim PTPATim]
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* [http://bigg.ucsd.edu/universal/reactions/UDPGP UDPGP]
 +
* [http://bigg.ucsd.edu/universal/reactions/UDPGPpp UDPGPpp]
 +
* [http://bigg.ucsd.edu/universal/reactions/UPPN UPPN]
 +
* [http://bigg.ucsd.edu/universal/reactions/VALTAim VALTAim]
 
== External links  ==
 
== External links  ==
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* MetaNetX (MNX) Equation : MNXR94954
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{{#set: common_name=Pantothenate and CoA biosynthesis}}
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* EC Number : 2.3.1.86
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{{#set: reaction found=17}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=75}}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase (n-C10:0)}}
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{{#set: completion rate=23.0}}
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{{#set: gene associated=EF2880|EF0283}}
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−
{{#set: in pathway=map01100|map01212|map00061}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
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Revision as of 19:28, 18 March 2018

Pathway map00770

  • common_name:
    • Pantothenate and CoA biosynthesis
  • Synonym(s):

Reaction(s) found

17 reactions found over 75 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=Aspsa&oldid=7338"