Difference between revisions of "Trnaleu"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CHLabc CHLabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Choline transport via ABC system...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00562 map00562] == * common_name: ** Inositol phosphate metabolism * Synonym(s): == Reaction(s) fo...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/CHLabc CHLabc] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00562 map00562] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Inositol phosphate metabolism
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* common name:
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** Choline transport via ABC system
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''21''' reactions in the full pathway
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** 1.0 [[atp]][c] '''+''' 1.0 [[chol]][e] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[chol]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c]
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* [[MI1PP]]
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* With common name(s):
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** 1 associated gene(s):
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** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Choline C5H14NO[e] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Choline C5H14NO[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c]
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*** [[EF2461]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[EF0675]]
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*** [[orthology-l_plantarum_wcfs1]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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* [[TPI]]
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* [[EF0862]]
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** 1 associated gene(s):
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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*** [[EF1962]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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** 3 reconstruction source(s) associated:
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* [[EF0865]]
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[EF0864]]
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== Reaction(s) not found ==
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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* [http://bigg.ucsd.edu/universal/reactions/D5KGK D5KGK]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [http://bigg.ucsd.edu/universal/reactions/D5KGPA D5KGPA]
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* [[EF0674]]
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* [http://bigg.ucsd.edu/universal/reactions/IBPHn IBPHn]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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* [http://bigg.ucsd.edu/universal/reactions/INOSTO INOSTO]
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* [[EF0863]]
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* [http://bigg.ucsd.edu/universal/reactions/INS2D INS2D]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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* [http://bigg.ucsd.edu/universal/reactions/MI134P4P MI134P4P]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [http://bigg.ucsd.edu/universal/reactions/MI134PK MI134PK]
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== Pathways  ==
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* [http://bigg.ucsd.edu/universal/reactions/MI134PP MI134PP]
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== Reconstruction information  ==
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* [http://bigg.ucsd.edu/universal/reactions/MI13PP MI13PP]
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* [[orthology]]:
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* [http://bigg.ucsd.edu/universal/reactions/MI14PP MI14PP]
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** [[pantograph]]:
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* [http://bigg.ucsd.edu/universal/reactions/MI1PS MI1PS]
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*** [[l_plantarum_wcfs1]]
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* [http://bigg.ucsd.edu/universal/reactions/MI34PP MI34PP]
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*** [[b_subtilis_subsp_subtilis_str168]]
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* [http://bigg.ucsd.edu/universal/reactions/MI3PP MI3PP]
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* [http://bigg.ucsd.edu/universal/reactions/MI3PSB MI3PSB]
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* [http://bigg.ucsd.edu/universal/reactions/MI4PP MI4PP]
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* [http://bigg.ucsd.edu/universal/reactions/MIHKPP MIHKPP]
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* [http://bigg.ucsd.edu/universal/reactions/MMSAD3 MMSAD3]
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* [http://bigg.ucsd.edu/universal/reactions/MMSAD3m MMSAD3m]
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* [http://bigg.ucsd.edu/universal/reactions/TPIh TPIh]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common_name=Inositol phosphate metabolism}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=38715#1 38715#1]
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{{#set: reaction found=2}}
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* MetaNetX (MNX) Equation : MNXR96691
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{{#set: total reaction=21}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=10.0}}
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{{#set: common name=Choline transport via ABC system}}
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{{#set: gene associated=EF0675|EF0862|EF0865|EF0864|EF0674|EF0863}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
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Revision as of 18:28, 18 March 2018

Pathway map00562

  • common_name:
    • Inositol phosphate metabolism
  • Synonym(s):

Reaction(s) found

2 reactions found over 21 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=Trnaleu&oldid=7351"