Difference between revisions of "MyrsACP"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR2 RNDR2] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonucleoside-diphosphate reductas...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICHORS_copy1 ICHORS_copy1] == * direction: ** REVERSIBLE * common name: ** Isochorismate synthase *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR2 RNDR2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ICHORS_copy1 ICHORS_copy1] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** Ribonucleoside-diphosphate reductase (GDP)
+
** Isochorismate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[gdp]][c] '''+''' 1.0 [[trdrd]][c] '''=>''' 1.0 [[dgdp]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[trdox]][c]
+
** 1.0 [[chor]][c] '''<=>''' 1.0 [[ichor]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 GDP C10H12N5O11P2[c] '''+''' 1.0 Reduced thioredoxin[c] '''=>''' 1.0 DGDP C10H12N5O10P2[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Oxidized thioredoxin[c]
+
** 1.0 Chorismate[c] '''<=>''' 1.0 Isochorismate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0470]]
+
* [[EF0447]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
* [[EF0471]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
* [[EF0472]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
** '''82''' reactions found over '''244''' reactions in the full pathway
 
* [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480]
 
** '''10''' reactions found over '''39''' reactions in the full pathway
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
** '''97''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[pantograph]]
*** [[b_subtilis_subsp_subtilis_str168]]
+
* Category: [[manual]]
 +
** Source: [[manual-curation_from_orthology]]
 
== External links  ==
 
== External links  ==
* BioCyc : META:GDPREDUCT-RXN
+
{{#set: direction=REVERSIBLE}}
* MetaNetX (MNX) Equation : MNXR104062
+
{{#set: common name=Isochorismate synthase}}
* KEGG Reaction : R02019
+
{{#set: gene associated=EF0447}}
* EC Number : 1.17.4.1
+
{{#set: in pathway=}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reconstruction category=orthology|manual}}
{{#set: common name=Ribonucleoside-diphosphate reductase (GDP)}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|manual-curation_from_orthology}}
{{#set: gene associated=EF0470|EF0471|EF0472}}
+
{{#set: in pathway=map01100|map00240|map00480|map00230}}
+
{{#set: reconstruction category=orthology}}
+
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:33, 18 March 2018

Reaction ICHORS_copy1

  • direction:
    • REVERSIBLE
  • common name:
    • Isochorismate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Chorismate[c] <=> 1.0 Isochorismate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links