Difference between revisions of "TransportSeed cit"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/aspsa aspsa] == * common name: ** L-Aspartate 4-semialdehyde * Synonym(s): == Reaction(s) kn...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/LDH_L LDH_L] == * direction: ** REVERSIBLE * common name: ** L-lactate dehydrogenase * Synonym(s):...")
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/aspsa aspsa] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/LDH_L LDH_L] ==
 +
* direction:
 +
** REVERSIBLE
 
* common name:
 
* common name:
** L-Aspartate 4-semialdehyde
+
** L-lactate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[CSPMDDH]]
+
* With identifiers:
* [[DHDPS]]
+
** 1.0 [[nad]][c] '''+''' 1.0 [[lac__L]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[pyr]][c]
== Reaction(s) known to produce the compound ==
+
* With common name(s):
== Reaction(s) of unknown directionality ==
+
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 L-Lactate[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 Pyruvate[c]
* [[HSDy]]
+
 
* [[ASAD]]
+
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0255]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
 +
** '''15''' reactions found over '''143''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 +
** '''25''' reactions found over '''135''' reactions in the full pathway
 +
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
 +
** '''31''' reactions found over '''163''' reactions in the full pathway
 +
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 +
** '''24''' reactions found over '''149''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: common name=L-Aspartate 4-semialdehyde}}
+
* EC Number : 1.1.1.27
{{#set: consumed by=CSPMDDH|DHDPS}}
+
* BioCyc : META:L-LACTATE-DEHYDROGENASE-RXN
{{#set: consumed or produced by=HSDy|ASAD}}
+
* MetaNetX (MNX) Equation : MNXR101040
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23444 23444]
 +
* Reactome : REACT_R-ATH-6807826
 +
* KEGG Reaction : R00703
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=L-lactate dehydrogenase}}
 +
{{#set: gene associated=EF0255}}
 +
{{#set: in pathway=map01100|map01110|map00640|map01120|map00270|map00620|map00010|map01130}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:34, 18 March 2018

Reaction LDH_L

  • direction:
    • REVERSIBLE
  • common name:
    • L-lactate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 L-Lactate[c] <=> 1.0 H+[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 Pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 1.1.1.27
  • BioCyc : META:L-LACTATE-DEHYDROGENASE-RXN
  • MetaNetX (MNX) Equation : MNXR101040
  • RHEA:
  • Reactome : REACT_R-ATH-6807826
  • KEGG Reaction : R00703