Difference between revisions of "Amacald"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RMK RMK] == * direction: ** LEFT-TO-RIGHT * common name: ** Rhamnulokinase * Synonym(s): == Reacti...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ECTOINEabc ECTOINEabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Ecotine transport in via...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/RMK RMK] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ECTOINEabc ECTOINEabc] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Rhamnulokinase
+
** Ecotine transport in via ABC system
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[rml]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[rml1p]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[ectoine]][e] '''=>''' 1.0 [[ectoine]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[adp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Rhamnulose[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 L-Rhamnulose 1-phosphate[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Ectoine C6H12N2O2[e] '''=>''' 1.0 Ectoine C6H12N2O2[c] '''+''' 1.0 H+[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0433]]
+
* [[EF0865]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* [[EF0862]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF0864]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF0863]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
 
−
** '''15''' reactions found over '''54''' reactions in the full pathway
 
−
* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
 
−
** '''22''' reactions found over '''63''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''104''' reactions found over '''715''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20117 20117]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32787#1 32787#1]
−
* MetaNetX (MNX) Equation : MNXR104039
+
* MetaNetX (MNX) Equation : MNXR97896
−
* KEGG Reaction : R03014
+
−
* EC Number : 2.7.1.5
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Rhamnulokinase}}
+
{{#set: common name=Ecotine transport in via ABC system}}
−
{{#set: gene associated=EF0433}}
+
{{#set: gene associated=EF0865|EF0862|EF0864|EF0863}}
−
{{#set: in pathway=map00040|map00051|map01120}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:35, 18 March 2018

Reaction ECTOINEabc

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ecotine transport in via ABC system
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 H2O H2O[c] + 1.0 Ectoine C6H12N2O2[e] => 1.0 Ectoine C6H12N2O2[c] + 1.0 H+[c] + 1.0 Phosphate[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR97896




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