Difference between revisions of "LalaDglu"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TRDR TRDR] == * direction: ** LEFT-TO-RIGHT * common name: ** Thioredoxin reductase (NADPH) * Synon...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLCRt2r GLCRt2r] == * direction: ** REVERSIBLE * common name: ** D-glucarate transport via proton s...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/TRDR TRDR] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLCRt2r GLCRt2r] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** Thioredoxin reductase (NADPH)
+
** D-glucarate transport via proton symport, reversible
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[trdox]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nadph]][c] '''=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[trdrd]][c]
+
** 1.0 [[h]][e] '''+''' 1.0 [[glcr]][e] '''<=>''' 1.0 [[glcr]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Oxidized thioredoxin[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 Reduced thioredoxin[c]
+
** 1.0 H+[e] '''+''' 1.0 D-Glucarate[e] '''<=>''' 1.0 D-Glucarate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1338]]
+
* [[EF2992]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
* [[EF2899]]
+
* [[EF0385]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
* [[EF1405]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map00450]]: [http://www.genome.jp/dbget-bin/www_bget?map00450 map00450]
 
** '''6''' reactions found over '''35''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
*** [[l_plantarum_wcfs1]]
+
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
* BioCyc : META:THIOREDOXIN-REDUCT-NADPH-RXN
+
* MetaNetX (MNX) Equation : MNXR100221
* MetaNetX (MNX) Equation : MNXR104766
+
{{#set: direction=REVERSIBLE}}
* KEGG Reaction : R02016
+
{{#set: common name=D-glucarate transport via proton symport, reversible}}
* EC Number : 1.6.4.5
+
{{#set: gene associated=EF2992|EF0385}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: in pathway=}}
{{#set: common name=Thioredoxin reductase (NADPH)}}
+
{{#set: gene associated=EF1338|EF2899|EF1405}}
+
{{#set: in pathway=map00450}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:35, 18 March 2018

Reaction GLCRt2r

  • direction:
    • REVERSIBLE
  • common name:
    • D-glucarate transport via proton symport, reversible
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 h[e] + 1.0 glcr[e] <=> 1.0 glcr[c] + 1.0 h[c]
  • With common name(s):
    • 1.0 H+[e] + 1.0 D-Glucarate[e] <=> 1.0 D-Glucarate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100221