Difference between revisions of "Succoa"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NADK3 NADK3] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD kinase dGTP * Synonym(s): ==...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OCTDPS OCTDPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Octaprenyl pyrophosphate synthase...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/OCTDPS OCTDPS] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Octaprenyl pyrophosphate synthase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[frdp]][c] '''+''' 5.0 [[ipdp]][c] '''=>''' 1.0 [[octdp]][c] '''+''' 5.0 [[ppi]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Farnesyl diphosphate[c] '''+''' 5.0 Isopentenyl diphosphate[c] '''=>''' 1.0 All-trans-Octaprenyl diphosphate[c] '''+''' 5.0 Diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[EF2057]] |
| − | ** [[pantograph]]-[[ | + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] |
| + | * [[EF3260]] | ||
| + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''179''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900] | ||
| + | ** '''14''' reactions found over '''67''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]] | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
== External links == | == External links == | ||
| − | * MetaNetX (MNX) Equation : | + | * RHEA: |
| − | * EC Number : 2. | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27798 27798] |
| + | * BioCyc : META:RXN-8992 | ||
| + | * MetaNetX (MNX) Equation : MNXR102153 | ||
| + | * KEGG Reaction : R09248 | ||
| + | * EC Number : 2.5.1.90 | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Octaprenyl pyrophosphate synthase}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=EF2057|EF3260}} |
| − | {{#set: in pathway=}} | + | {{#set: in pathway=map01110|map00900}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Revision as of 18:35, 18 March 2018
Contents
Reaction OCTDPS
- direction:
- LEFT-TO-RIGHT
- common name:
- Octaprenyl pyrophosphate synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Farnesyl diphosphate[c] + 5.0 Isopentenyl diphosphate[c] => 1.0 All-trans-Octaprenyl diphosphate[c] + 5.0 Diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map00900: map00900
- 14 reactions found over 67 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- BioCyc : META:RXN-8992
- MetaNetX (MNX) Equation : MNXR102153
- KEGG Reaction : R09248
- EC Number : 2.5.1.90
