Difference between revisions of "Rmn"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NADH10 NADH10] == * direction: ** LEFT-TO-RIGHT * common name: ** NADH dehydrogenase (menaquinone-8...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYAMDTRc GLYAMDTRc] == * direction: ** REVERSIBLE * common name: ** Glycine amidinotransferase (c)...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NADH10 NADH10] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYAMDTRc GLYAMDTRc] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** NADH dehydrogenase (menaquinone-8 & 0 protons)
+
** Glycine amidinotransferase (c)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[mqn8]][c] '''+''' 1.0 [[nadh]][c] '''=>''' 1.0 [[mql8]][c] '''+''' 1.0 [[nad]][c]
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** 1.0 [[arg__L]][c] '''+''' 1.0 [[gly]][c] '''<=>''' 1.0 [[orn]][c] '''+''' 1.0 [[gudac]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 Menaquinone 8[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''=>''' 1.0 Menaquinol 8[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c]
+
** 1.0 L-Arginine[c] '''+''' 1.0 Glycine[c] '''<=>''' 1.0 Ornithine[c] '''+''' 1.0 Guanidinoacetate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF2055]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
* [[EF3257]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
 +
** '''22''' reactions found over '''149''' reactions in the full pathway
 +
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
 +
** '''23''' reactions found over '''133''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[gap-filling]]
** [[pantograph]]:
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR100312
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29243 29243]
+
* EC Number : 2.1.4.1
* MetaNetX (MNX) Equation : MNXR101863
+
{{#set: direction=REVERSIBLE}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=Glycine amidinotransferase (c)}}
{{#set: common name=NADH dehydrogenase (menaquinone-8 & 0 protons)}}
+
{{#set: in pathway=map01100|map00330|map00260}}
{{#set: gene associated=EF2055|EF3257}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: in pathway=}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
+

Revision as of 18:36, 18 March 2018

Reaction GLYAMDTRc

  • direction:
    • REVERSIBLE
  • common name:
    • Glycine amidinotransferase (c)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Arginine[c] + 1.0 Glycine[c] <=> 1.0 Ornithine[c] + 1.0 Guanidinoacetate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100312
  • EC Number : 2.1.4.1