Difference between revisions of "UAGDP"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FRUK FRUK] == * direction: ** LEFT-TO-RIGHT * common name: ** Fructose-1-phosphate kinase * Synonym...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SACCD_c SACCD_c] == * direction: ** LEFT-TO-RIGHT * common name: ** L-lysine-alpha-ketoglutarate re...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/FRUK FRUK] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SACCD_c SACCD_c] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Fructose-1-phosphate kinase
+
** L-lysine-alpha-ketoglutarate reductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[f1p]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[fdp]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[akg]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nadph]][c] '''+''' 1.0 [[lys__L]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[nadp]][c] '''+''' 1.0 [[saccrp__L]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 D-Fructose 1-phosphate[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 D-Fructose 1,6-bisphosphate[c] '''+''' 1.0 H+[c]
+
** 1.0 2-Oxoglutarate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 L-Lysine[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 L Saccharopine C11H19N2O6[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF0718]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
−
* [[EF0693]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
 
−
** '''22''' reactions found over '''63''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[meneco]]
−
*** [[l_plantarum_wcfs1]]
+
**** Comment: [[added for gapfilling]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14213 14213]
 
−
* MetaNetX (MNX) Equation : MNXR99652
 
−
* EC Number : 2.7.1.56
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Fructose-1-phosphate kinase}}
+
{{#set: common name=L-lysine-alpha-ketoglutarate reductase}}
−
{{#set: gene associated=EF0718|EF0693}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=map00051}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction comment=added for gapfilling}}

Revision as of 19:37, 18 March 2018

Reaction SACCD_c

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • L-lysine-alpha-ketoglutarate reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2-Oxoglutarate[c] + 1.0 H+[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 L-Lysine[c] => 1.0 H2O H2O[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c] + 1.0 L Saccharopine C11H19N2O6[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=UAGDP&oldid=7740"