Difference between revisions of "CSND"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPNCL2 PPNCL2] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphopantothenate-cysteine liga...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALLTAMH ALLTAMH] == * direction: ** LEFT-TO-RIGHT * common name: ** Allantoate amidohydrolase * Syn...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/PPNCL2 PPNCL2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALLTAMH ALLTAMH] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Phosphopantothenate-cysteine ligase
+
** Allantoate amidohydrolase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[cys__L]][c] '''+''' 1.0 [[ctp]][c] '''+''' 1.0 [[4ppan]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[cmp]][c] '''+''' 1.0 [[4ppcys]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[alltt]][c] '''+''' 2.0 [[h2o]][c] '''+''' 2.0 [[h]][c] '''=>''' 1.0 [[urdglyc]][c] '''+''' 1.0 [[co2]][c] '''+''' 2.0 [[nh4]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Cysteine[c] '''+''' 1.0 CTP C9H12N3O14P3[c] '''+''' 1.0 D-4'-Phosphopantothenate[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 CMP C9H12N3O8P[c] '''+''' 1.0 N-((R)-4-Phosphopantothenoyl)-L-cysteine[c] '''+''' 1.0 H+[c]
+
** 1.0 Allantoate[c] '''+''' 2.0 H2O H2O[c] '''+''' 2.0 H+[c] '''=>''' 1.0 (-)-Ureidoglycolate[c] '''+''' 1.0 CO2 CO2[c] '''+''' 2.0 Ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2656]]
+
* [[EF2997]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
** '''97''' reactions found over '''298''' reactions in the full pathway
−
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
+
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
−
** '''17''' reactions found over '''75''' reactions in the full pathway
+
** '''104''' reactions found over '''715''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19397 19397]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32279 32279]
−
* BioCyc : META:P-PANTOCYSLIG-RXN
+
* MetaNetX (MNX) Equation : MNXR95768
−
* MetaNetX (MNX) Equation : MNXR103119
+
* EC Number : 3.5.3.9
−
* KEGG Reaction : R04231
+
−
* EC Number : 6.3.2.5
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Phosphopantothenate-cysteine ligase}}
+
{{#set: common name=Allantoate amidohydrolase}}
−
{{#set: gene associated=EF2656}}
+
{{#set: gene associated=EF2997}}
−
{{#set: in pathway=map01100|map00770}}
+
{{#set: in pathway=map00230|map01120}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Revision as of 19:37, 18 March 2018

Reaction ALLTAMH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Allantoate amidohydrolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Allantoate[c] + 2.0 H2O H2O[c] + 2.0 H+[c] => 1.0 (-)-Ureidoglycolate[c] + 1.0 CO2 CO2[c] + 2.0 Ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR95768
  • EC Number : 3.5.3.9




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