Difference between revisions of "Ivcoa"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UAG2E UAG2E] == * direction: ** REVERSIBLE * common name: ** UDP-N-acetylglucosamine 2-epimerase *...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_ins ExchangeSeed_ins] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/UAG2E UAG2E] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_ins ExchangeSeed_ins] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** UDP-N-acetylglucosamine 2-epimerase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[uacgam]][c] '''<=>''' 1.0 [[uacmam]][c]
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** 1.0 [[ins]][C-BOUNDARY] '''<=>''' 1.0 [[ins]][e]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 UDP-N-acetyl-D-glucosamine[c] '''<=>''' 1.0 UDP-N-acetyl-D-mannosamine[c]
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** 1.0 Inosine[C-BOUNDARY] '''<=>''' 1.0 Inosine[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF2917]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
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** '''460''' reactions found over '''2349''' reactions in the full pathway
 
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* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
 
−
** '''24''' reactions found over '''80''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[manual]]
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** [[pantograph]]:
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** Source: [[manual-import_from_medium]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
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*** [[l_plantarum_wcfs1]]
+
−
*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17213 17213]
 
−
* BioCyc : META:UDPGLCNACEPIM-RXN
 
−
* MetaNetX (MNX) Equation : MNXR105024
 
−
* KEGG Reaction : R00420
 
−
* EC Number : 5.1.3.14
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
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{{#set: common name=UDP-N-acetylglucosamine 2-epimerase}}
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{{#set: in pathway=}}
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{{#set: gene associated=EF2917}}
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{{#set: reconstruction category=manual}}
−
{{#set: in pathway=map01100|map00520}}
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{{#set: reconstruction source=manual-import_from_medium}}
−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+

Revision as of 19:37, 18 March 2018

Reaction ExchangeSeed_ins

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 ins[C-BOUNDARY] <=> 1.0 ins[e]
  • With common name(s):
    • 1.0 Inosine[C-BOUNDARY] <=> 1.0 Inosine[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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