Difference between revisions of "2hbut"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PZS PZS] == * direction: ** LEFT-TO-RIGHT * common name: ** precursor Z synthase * Synonym(s): ==...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCDx GLYCDx] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerol dehydrogenase * Synonym(...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/PZS PZS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCDx GLYCDx] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** precursor Z synthase
+
** Glycerol dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[gtp]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[PreZ]][c]
+
** 1.0 [[nad]][c] '''+''' 1.0 [[glyc]][c] '''=>''' 1.0 [[dha]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 GTP C10H12N5O14P3[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 Precursor_Z_in_molybdenum_cofactor_biosynthesis[c]
+
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Glycerol[c] '''=>''' 1.0 Dihydroxyacetone[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1393]]
+
* [[EF1358]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
* [[EF1392]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
* [[EF1395]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00561]]: [http://www.genome.jp/dbget-bin/www_bget?map00561 map00561]
 +
** '''7''' reactions found over '''83''' reactions in the full pathway
 +
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
 +
** '''15''' reactions found over '''143''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[pantograph]]
* [[manual]]:
+
** [[curation_from_orthology]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13769 13769]
 +
* BioCyc : META:GLYCDEH-RXN
 +
* MetaNetX (MNX) Equation : MNXR100326
 +
* KEGG Reaction : R01034
 +
* EC Number : 1.1.1.6
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=precursor Z synthase}}
+
{{#set: common name=Glycerol dehydrogenase}}
{{#set: gene associated=EF1393|EF1392|EF1395}}
+
{{#set: gene associated=EF1358}}
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map00561|map00640}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=l_plantarum_wcfs1}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction source=curation_from_orthology}}
 

Revision as of 18:37, 18 March 2018

Reaction GLYCDx

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycerol dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 Glycerol[c] => 1.0 Dihydroxyacetone[c] + 1.0 H+[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:GLYCDEH-RXN
  • MetaNetX (MNX) Equation : MNXR100326
  • KEGG Reaction : R01034
  • EC Number : 1.1.1.6