Difference between revisions of "Man1p"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HPYRRx HPYRRx] == * direction: ** LEFT-TO-RIGHT * common name: ** Hydroxypyruvate reductase (NADH)...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OBTFL OBTFL] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-Oxobutanoate formate lyase * Syno...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/HPYRRx HPYRRx] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/OBTFL OBTFL] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Hydroxypyruvate reductase (NADH)
+
** 2-Oxobutanoate formate lyase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[hpyr]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c] '''=>''' 1.0 [[nad]][c] '''+''' 1.0 [[glyc__R]][c]
+
** 1.0 [[2obut]][c] '''+''' 1.0 [[coa]][c] '''=>''' 1.0 [[for]][c] '''+''' 1.0 [[ppcoa]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Hydroxypyruvate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 (R)-Glycerate[c]
+
** 1.0 2-Oxobutanoate[c] '''+''' 1.0 Coenzyme A[c] '''=>''' 1.0 Formate[c] '''+''' 1.0 Propanoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF3141]]
+
* [[EF1612]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
* [[EF1613]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
+
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
−
** '''21''' reactions found over '''129''' reactions in the full pathway
+
** '''15''' reactions found over '''143''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
** '''104''' reactions found over '''715''' reactions in the full pathway
 
** '''104''' reactions found over '''715''' reactions in the full pathway
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
+
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
−
** '''45''' reactions found over '''220''' reactions in the full pathway
+
** '''31''' reactions found over '''163''' reactions in the full pathway
−
* [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680]
+
* [[map00650]]: [http://www.genome.jp/dbget-bin/www_bget?map00650 map00650]
−
** '''18''' reactions found over '''75''' reactions in the full pathway
+
** '''14''' reactions found over '''156''' reactions in the full pathway
−
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
+
−
** '''23''' reactions found over '''133''' reactions in the full pathway
+
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''135''' reactions found over '''694''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17905 17905]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28054 28054]
−
* BioCyc : META:GLYCERATE-DEHYDROGENASE-RXN
+
* BioCyc : META:KETOBUTFORMLY-RXN
−
* MetaNetX (MNX) Equation : MNXR100325
+
* MetaNetX (MNX) Equation : MNXR102135
−
* KEGG Reaction : R01388
+
* KEGG Reaction : R06987
−
* EC Number : 1.1.1.26
+
* EC Number : 2.3.1
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Hydroxypyruvate reductase (NADH)}}
+
{{#set: common name=2-Oxobutanoate formate lyase}}
−
{{#set: gene associated=EF3141}}
+
{{#set: gene associated=EF1612|EF1613}}
−
{{#set: in pathway=map01100|map00630|map01110|map01120|map01200|map00680|map00260|map01130}}
+
{{#set: in pathway=map01100|map00640|map01120|map00620|map00650}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Revision as of 18:37, 18 March 2018

Reaction OBTFL

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-Oxobutanoate formate lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2-Oxobutanoate[c] + 1.0 Coenzyme A[c] => 1.0 Formate[c] + 1.0 Propanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:KETOBUTFORMLY-RXN
  • MetaNetX (MNX) Equation : MNXR102135
  • KEGG Reaction : R06987
  • EC Number : 2.3.1




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