Difference between revisions of "HgmeACP"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FBA2 FBA2] == * direction: ** REVERSIBLE * common name: ** D Fructose 1 phosphate D glyceraldehyde...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TDPDRE TDPDRE] == * direction: ** LEFT-TO-RIGHT * common name: ** DTDP-4-dehydrorhamnose 3,5-epimer...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/FBA2 FBA2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/TDPDRE TDPDRE] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** D Fructose 1 phosphate D glyceraldehyde 3 phosphate lyase
+
** DTDP-4-dehydrorhamnose 3,5-epimerase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[f1p]][c] '''<=>''' 1.0 [[glyald]][c] '''+''' 1.0 [[dhap]][c]
+
** 1.0 [[dtdp4d6dg]][c] '''=>''' 1.0 [[dtdp4d6dm]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 D-Fructose 1-phosphate[c] '''<=>''' 1.0 D-Glyceraldehyde[c] '''+''' 1.0 Dihydroxyacetone phosphate[c]
+
** 1.0 DTDP-4-dehydro-6-deoxy-D-glucose[c] '''=>''' 1.0 DTDP-4-dehydro-6-deoxy-L-mannose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1167]]
+
* [[EF2193]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
** '''7''' reactions found over '''14''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
−
** '''104''' reactions found over '''715''' reactions in the full pathway
+
−
* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
+
−
** '''22''' reactions found over '''63''' reactions in the full pathway
+
−
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
+
−
** '''16''' reactions found over '''71''' reactions in the full pathway
+
−
* [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680]
+
−
** '''18''' reactions found over '''75''' reactions in the full pathway
+
−
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
+
−
** '''24''' reactions found over '''149''' reactions in the full pathway
+
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''135''' reactions found over '''694''' reactions in the full pathway
 
** '''135''' reactions found over '''694''' reactions in the full pathway
−
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
+
* [[map00523]]: [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
−
** '''26''' reactions found over '''69''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30851 30851]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16969 16969]
−
* MetaNetX (MNX) Equation : MNXR99460
+
* BioCyc : META:DTDPDEHYDRHAMEPIM-RXN
−
* KEGG Reaction : R02568
+
* MetaNetX (MNX) Equation : MNXR104759
−
* EC Number : 4.1.2.13
+
* KEGG Reaction : R06514
−
{{#set: direction=REVERSIBLE}}
+
* EC Number : 5.1.3.13
−
{{#set: common name=D Fructose 1 phosphate D glyceraldehyde 3 phosphate lyase}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=EF1167}}
+
{{#set: common name=DTDP-4-dehydrorhamnose 3,5-epimerase}}
−
{{#set: in pathway=map01100|map01110|map01120|map00051|map00710|map00680|map00010|map01130|map00030}}
+
{{#set: gene associated=EF2193}}
 +
{{#set: in pathway=map00521|map01130|map00523}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:37, 18 March 2018

Reaction TDPDRE

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • DTDP-4-dehydrorhamnose 3,5-epimerase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 DTDP-4-dehydro-6-deoxy-D-glucose[c] => 1.0 DTDP-4-dehydro-6-deoxy-L-mannose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:DTDPDEHYDRHAMEPIM-RXN
  • MetaNetX (MNX) Equation : MNXR104759
  • KEGG Reaction : R06514
  • EC Number : 5.1.3.13




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