Difference between revisions of "Trnalys"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/THRAi THRAi] == * direction: ** LEFT-TO-RIGHT * common name: ** Threonine aldolase * Synonym(s): =...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLNabc GLNabc] == * direction: ** LEFT-TO-RIGHT * common name: ** L-glutamine transport via ABC sys...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/THRAi THRAi] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLNabc GLNabc] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Threonine aldolase
+
** L-glutamine transport via ABC system
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[thr__L]][c] '''=>''' 1.0 [[acald]][c] '''+''' 1.0 [[gly]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[gln__L]][e] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[gln__L]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 L-Threonine[c] '''=>''' 1.0 Acetaldehyde[c] '''+''' 1.0 Glycine[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 L-Glutamine[e] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 L-Glutamine[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2550]]
+
* [[EF0805]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF0806]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF0761]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF0804]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF0760]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-l_plantarum_wcfs1]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
* [[manual]]:
+
** [[curation_from_orthology]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29895#1 29895#1]
 +
* MetaNetX (MNX) Equation : MNXR100258
 +
* EC Number : 3.6.3.21
 +
* BioCyc : META:ABC-12-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Threonine aldolase}}
+
{{#set: common name=L-glutamine transport via ABC system}}
{{#set: gene associated=EF2550}}
+
{{#set: gene associated=EF0805|EF0806|EF0761|EF0804|EF0760}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction source=curation_from_orthology}}
 

Revision as of 18:37, 18 March 2018

Reaction GLNabc

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • L-glutamine transport via ABC system
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 L-Glutamine[e] + 1.0 ATP C10H12N5O13P3[c] => 1.0 L-Glutamine[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR100258
  • EC Number : 3.6.3.21
  • BioCyc : META:ABC-12-RXN