Difference between revisions of "5dglcn"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SERTRS2 SERTRS2] == * direction: ** LEFT-TO-RIGHT * common name: ** Seryl-tRNA synthetase (selenocy...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_ade ExchangeSeed_ade] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/SERTRS2 SERTRS2] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_ade ExchangeSeed_ade] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
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** REVERSIBLE
−
* common name:
+
−
** Seryl-tRNA synthetase (selenocystein)
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ser__L]][c] '''+''' 1.0 [[trnasecys]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[sertrna_sec]][c] '''+''' 1.0 [[ppi]][c]
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** 1.0 [[ade]][C-BOUNDARY] '''<=>''' 1.0 [[ade]][e]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Serine[c] '''+''' 1.0 TRNA(SeCys)[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 L-Seryl-tRNA(Sec)[c] '''+''' 1.0 Diphosphate[c]
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** 1.0 Adenine[C-BOUNDARY] '''<=>''' 1.0 Adenine[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF3292]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
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* [[EF0100]]
 
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
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* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
 
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** '''23''' reactions found over '''49''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* [[orthology]]:
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* Category: [[manual]]
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** [[pantograph]]:
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** Source: [[manual-import_from_medium]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR104309
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{{#set: direction=REVERSIBLE}}
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* EC Number : 6.1.1.11
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{{#set: in pathway=}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reconstruction category=manual}}
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{{#set: common name=Seryl-tRNA synthetase (selenocystein)}}
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{{#set: reconstruction source=manual-import_from_medium}}
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{{#set: gene associated=EF3292|EF0100}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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{{#set: in pathway=map00970}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
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Revision as of 19:38, 18 March 2018

Reaction ExchangeSeed_ade

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 ade[C-BOUNDARY] <=> 1.0 ade[e]
  • With common name(s):
    • 1.0 Adenine[C-BOUNDARY] <=> 1.0 Adenine[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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