Difference between revisions of "Ap5a"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ZNabc ZNabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Zinc transport via ABC system * Syn...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD7 NTD7] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (AMP) * Synonym(s):...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ZNabc ZNabc] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NTD7 NTD7] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Zinc transport via ABC system
+
** 5'-nucleotidase (AMP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[zn2]][e] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[zn2]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[pi]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[amp]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[adn]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Zinc[e] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Zinc[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Phosphate[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Adenosine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0055]]
+
* [[EF0062]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF3206]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF0056]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF0057]]
+
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 +
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
 +
** '''19''' reactions found over '''97''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29795 29795]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29375 29375]
−
* MetaNetX (MNX) Equation : MNXR105281
+
* BioCyc : META:AMP-DEPHOSPHORYLATION-RXN
−
* EC Number : 3.6.3.5
+
* MetaNetX (MNX) Equation : MNXR102037
−
* BioCyc : META:ABC-63-RXN
+
* KEGG Reaction : R00183
 +
* EC Number : 3.1.3.5
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Zinc transport via ABC system}}
+
{{#set: common name=5'-nucleotidase (AMP)}}
−
{{#set: gene associated=EF0055|EF3206|EF0056|EF0057}}
+
{{#set: gene associated=EF0062}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map00240|map01110|map00230|map00760}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:38, 18 March 2018

Reaction NTD7

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase (AMP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 AMP C10H12N5O7P[c] => 1.0 Phosphate[c] + 1.0 Adenosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:AMP-DEPHOSPHORYLATION-RXN
  • MetaNetX (MNX) Equation : MNXR102037
  • KEGG Reaction : R00183
  • EC Number : 3.1.3.5




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