Difference between revisions of "AIRC3"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/rmn rmn] == * common name: ** L-Rhamnose * Synonym(s): == Reaction(s) known to consume the c...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TPI TPI] == * direction: ** REVERSIBLE * common name: ** Triose-phosphate isomerase * Synonym(s):...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/rmn rmn] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TPI TPI] ==
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* direction:
 +
** REVERSIBLE
 
* common name:
 
* common name:
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** L-Rhamnose
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** Triose-phosphate isomerase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1.0 [[dhap]][c] '''<=>''' 1.0 [[g3p]][c]
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* [[RMI]]
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* With common name(s):
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** 1.0 Dihydroxyacetone phosphate[c] '''<=>''' 1.0 Glyceraldehyde 3-phosphate[c]
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== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* [[EF1962]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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** '''104''' reactions found over '''715''' reactions in the full pathway
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* [[map00562]]: [http://www.genome.jp/dbget-bin/www_bget?map00562 map00562]
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** '''2''' reactions found over '''21''' reactions in the full pathway
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* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
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** '''45''' reactions found over '''220''' reactions in the full pathway
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* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
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** '''22''' reactions found over '''63''' reactions in the full pathway
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* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
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** '''16''' reactions found over '''71''' reactions in the full pathway
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* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
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** '''24''' reactions found over '''149''' reactions in the full pathway
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* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
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** '''56''' reactions found over '''228''' reactions in the full pathway
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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** '''135''' reactions found over '''694''' reactions in the full pathway
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== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=L-Rhamnose}}
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* EC Number : 5.3.1.1
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{{#set: consumed or produced by=RMI}}
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* BioCyc : META:TRIOSEPISOMERIZATION-RXN
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* MetaNetX (MNX) Equation : MNXR104918
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18585 18585]
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* Reactome : REACT_R-ATH-70454
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* KEGG Reaction : R01015
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Triose-phosphate isomerase}}
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{{#set: gene associated=EF1962}}
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{{#set: in pathway=map01100|map01110|map01120|map00562|map01200|map00051|map00710|map00010|map01230|map01130}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:38, 18 March 2018

Reaction TPI

  • direction:
    • REVERSIBLE
  • common name:
    • Triose-phosphate isomerase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Dihydroxyacetone phosphate[c] <=> 1.0 Glyceraldehyde 3-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 5.3.1.1
  • BioCyc : META:TRIOSEPISOMERIZATION-RXN
  • MetaNetX (MNX) Equation : MNXR104918
  • RHEA:
  • Reactome : REACT_R-ATH-70454
  • KEGG Reaction : R01015




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