Difference between revisions of "Nonal"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DKII DKII] == * direction: ** LEFT-TO-RIGHT * common name: ** 2 dehydro 3 deoxy D gluconate 5 dehyd...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FTHFLi FTHFLi] == * direction: ** LEFT-TO-RIGHT * common name: ** Formate-tetrahydrofolate ligase *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/DKII DKII] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/FTHFLi FTHFLi] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 2 dehydro 3 deoxy D gluconate 5 dehydrogenase
+
** Formate-tetrahydrofolate ligase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nadh]][c] '''+''' 1.0 [[46dh25dohxn]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[2ddglcn]][c] '''+''' 1.0 [[nad]][c]
+
** 1.0 [[for]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[thf]][c] '''=>''' 1.0 [[10fthf]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 4S  4 6 Dihydroxy 2 5 dioxohexanoate C6H7O6[c] '''+''' 1.0 H+[c] '''=>''' 1.0 2-Dehydro-3-deoxy-D-gluconate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c]
+
** 1.0 Formate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 5,6,7,8-Tetrahydrofolate[c] '''=>''' 1.0 10-Formyltetrahydrofolate[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2263]]
+
* [[EF1725]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
−
* [[EF0426]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 +
** '''14''' reactions found over '''157''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''45''' reactions found over '''220''' reactions in the full pathway
 +
* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
 +
** '''14''' reactions found over '''65''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR97493
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20221 20221]
 +
* Reactome : REACT_R-ATH-5696839
 +
* MetaNetX (MNX) Equation : MNXR99672
 +
* KEGG Reaction : R00943
 +
* EC Number : 6.3.4.3
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2 dehydro 3 deoxy D gluconate 5 dehydrogenase}}
+
{{#set: common name=Formate-tetrahydrofolate ligase}}
−
{{#set: gene associated=EF2263|EF0426}}
+
{{#set: gene associated=EF1725}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map00720|map01200|map00670|map01120}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:38, 18 March 2018

Reaction FTHFLi

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Formate-tetrahydrofolate ligase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Formate[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 5,6,7,8-Tetrahydrofolate[c] => 1.0 10-Formyltetrahydrofolate[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • Reactome : REACT_R-ATH-5696839
  • MetaNetX (MNX) Equation : MNXR99672
  • KEGG Reaction : R00943
  • EC Number : 6.3.4.3




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