Difference between revisions of "Ser D"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CTPS1 CTPS1] == * direction: ** LEFT-TO-RIGHT * common name: ** CTP synthase NH3 * Synonym(s): =...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMN TMN] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiaminase * Synonym(s): == Reaction F...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/TMN TMN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Thiaminase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[thm]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[4mhetz]][c] '''+''' 1.0 [[4ahmmp]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Thiamin[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 H+[c] '''+''' 1.0 4-Methyl-5-(2-hydroxyethyl)-thiazole[c] '''+''' 1.0 4-Amino-5-hydroxymethyl-2-methylpyrimidine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[EF2767]] |
| − | + | ||
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730] | ||
| + | ** '''11''' reactions found over '''24''' reactions in the full pathway | ||
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
** '''460''' reactions found over '''2349''' reactions in the full pathway | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]] | + | * Category: [[orthology]] |
| − | ** | + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| − | + | *** Tool: [[pantograph]] | |
| − | *** [[ | + | |
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17509 17509] |
| − | * BioCyc : META: | + | * BioCyc : META:THIAMINASE-RXN |
| − | * MetaNetX (MNX) Equation : | + | * MetaNetX (MNX) Equation : MNXR104901 |
| − | * KEGG Reaction : | + | * KEGG Reaction : R02133 |
| − | * EC Number : | + | * EC Number : 3.5.99.2 |
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Thiaminase}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=EF2767}} |
| − | {{#set: in pathway= | + | {{#set: in pathway=map00730|map01100}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Revision as of 18:38, 18 March 2018
Contents
Reaction TMN
- direction:
- LEFT-TO-RIGHT
- common name:
- Thiaminase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Thiamin[c] + 1.0 H2O H2O[c] => 1.0 H+[c] + 1.0 4-Methyl-5-(2-hydroxyethyl)-thiazole[c] + 1.0 4-Amino-5-hydroxymethyl-2-methylpyrimidine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map00730: map00730
- 11 reactions found over 24 reactions in the full pathway
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
External links
- RHEA:
- BioCyc : META:THIAMINASE-RXN
- MetaNetX (MNX) Equation : MNXR104901
- KEGG Reaction : R02133
- EC Number : 3.5.99.2
