Difference between revisions of "Methf"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMDS TMDS] == * direction: ** LEFT-TO-RIGHT * common name: ** Thymidylate synthase * Synonym(s): =...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DHNAOT4 DHNAOT4] == * direction: ** LEFT-TO-RIGHT * common name: ** 1,4-dihydroxy-2-naphthoate octa...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/TMDS TMDS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DHNAOT4 DHNAOT4] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Thymidylate synthase
+
** 1,4-dihydroxy-2-naphthoate octaprenyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[dump]][c] '''+''' 1.0 [[mlthf]][c] '''=>''' 1.0 [[dhf]][c] '''+''' 1.0 [[dtmp]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[octdp]][c] '''+''' 1.0 [[dhna]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[2dmmql8]][c] '''+''' 1.0 [[ppi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 DUMP C9H11N2O8P[c] '''+''' 1.0 5,10-Methylenetetrahydrofolate[c] '''=>''' 1.0 7,8-Dihydrofolate[c] '''+''' 1.0 DTMP C10H13N2O8P[c]
+
** 1.0 H+[c] '''+''' 1.0 All-trans-Octaprenyl diphosphate[c] '''+''' 1.0 1,4-Dihydroxy-2-naphthoate[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 2-Demethylmenaquinol 8[c] '''+''' 1.0 Diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1576]]
+
* [[EF2056]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
* [[EF3254]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
−
** '''82''' reactions found over '''244''' reactions in the full pathway
 
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
+
* [[map00130]]: [http://www.genome.jp/dbget-bin/www_bget?map00130 map00130]
−
** '''14''' reactions found over '''65''' reactions in the full pathway
+
** '''9''' reactions found over '''40''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12104 12104]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30099 30099]
−
* MetaNetX (MNX) Equation : MNXR104889
+
* MetaNetX (MNX) Equation : MNXR97408
−
* KEGG Reaction : R02101
+
* EC Number : 2.5.1.74
−
* EC Number : 2.1.1.45
+
* BioCyc : META:DMK-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Thymidylate synthase}}
+
{{#set: common name=1,4-dihydroxy-2-naphthoate octaprenyltransferase}}
−
{{#set: gene associated=EF1576}}
+
{{#set: gene associated=EF2056|EF3254}}
−
{{#set: in pathway=map00240|map01100|map00670}}
+
{{#set: in pathway=map01100|map00130|map01110}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Revision as of 19:39, 18 March 2018

Reaction DHNAOT4

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 1,4-dihydroxy-2-naphthoate octaprenyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 All-trans-Octaprenyl diphosphate[c] + 1.0 1,4-Dihydroxy-2-naphthoate[c] => 1.0 CO2 CO2[c] + 1.0 2-Demethylmenaquinol 8[c] + 1.0 Diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR97408
  • EC Number : 2.5.1.74
  • BioCyc : META:DMK-RXN




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