Difference between revisions of "Ipdp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/M1PD M1PD] == * direction: ** REVERSIBLE * common name: ** Mannitol-1-phosphate 5-dehydrogenase * S...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AASAD3 AASAD3] == * direction: ** LEFT-TO-RIGHT * common name: ** L-aminoadipate-semialdehyde dehyd...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/M1PD M1PD] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/AASAD3 AASAD3] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Mannitol-1-phosphate 5-dehydrogenase
+
** L-aminoadipate-semialdehyde dehydrogenase (NADH)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[mnl1p]][c] '''+''' 1.0 [[nad]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[f6p]][c] '''+''' 1.0 [[nadh]][c]
+
** 1.0 [[L2aadp6sa]][c] '''+''' 1.0 [[nad]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[nadh]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[L2aadp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 D-Mannitol 1-phosphate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 D-Fructose 6-phosphate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
+
** 1.0 L 2 Aminoadipate 6 semialdehyde C6H11NO3[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 2.0 H+[c] '''+''' 1.0 L 2 Aminoadipate C6H10NO4[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF0413]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''22''' reactions found over '''63''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00310]]: [http://www.genome.jp/dbget-bin/www_bget?map00310 map00310]
 +
** '''6''' reactions found over '''138''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
 +
** '''13''' reactions found over '''34''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''56''' reactions found over '''228''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[meneco]]
−
*** [[l_plantarum_wcfs1]]
+
**** Comment: [[added for gapfilling]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
 +
* EC Number : 1.2.1.31
 +
* BioCyc : META:ALLYSINE-DEHYDROG-RXN
 +
* MetaNetX (MNX) Equation : MNXR95158
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19661 19661]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12308 12308]
−
* BioCyc : META:MANNPDEHYDROG-RXN
+
* Reactome : REACT_R-ATH-70941
−
* MetaNetX (MNX) Equation : MNXR101311
+
* KEGG Reaction : R03102
−
* KEGG Reaction : R02703
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* EC Number : 1.1.1.17
+
{{#set: common name=L-aminoadipate-semialdehyde dehydrogenase (NADH)}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: in pathway=map01100|map00310|map01110|map00300|map01230|map01130}}
−
{{#set: common name=Mannitol-1-phosphate 5-dehydrogenase}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: gene associated=EF0413}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: in pathway=map00051}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+

Revision as of 18:40, 18 March 2018

Reaction AASAD3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • L-aminoadipate-semialdehyde dehydrogenase (NADH)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L 2 Aminoadipate 6 semialdehyde C6H11NO3[c] + 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 H2O H2O[c] => 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 2.0 H+[c] + 1.0 L 2 Aminoadipate C6H10NO4[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • EC Number : 1.2.1.31
  • BioCyc : META:ALLYSINE-DEHYDROG-RXN
  • MetaNetX (MNX) Equation : MNXR95158
  • RHEA:
  • Reactome : REACT_R-ATH-70941
  • KEGG Reaction : R03102




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