Difference between revisions of "TREpts"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/pyr pyr] == * common name: ** Pyruvate * Synonym(s): == Reaction(s) known to consume the com...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/P5CR P5CR] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyrroline-5-carboxylate reductase * S...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/pyr pyr] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/P5CR P5CR] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** Pyruvate
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** Pyrroline-5-carboxylate reductase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[POX]]
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* With identifiers:
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* [[AEPPT]]
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** 1.0 [[1pyr5c]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[nadph]][c] '''=>''' 1.0 [[pro__L]][c] '''+''' 1.0 [[nadp]][c]
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* [[PFL]]
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* With common name(s):
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* [[DHDPS]]
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** 1.0 1-Pyrroline-5-carboxylate[c] '''+''' 2.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''=>''' 1.0 L-Proline[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
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* [[PPS]]
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* [[PC]]
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== Genes associated with this reaction  ==
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* [[ACLS]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[DXPS]]
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* [[EF0961]]
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* [[PDH]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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* [[ACHBS]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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== Reaction(s) known to produce the compound ==
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[L_LACD2]]
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== Pathways  ==
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* [[L_LACD3]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [[SHCHCS3]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[SBTpts]]
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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* [[GLCpts]]
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** '''135''' reactions found over '''694''' reactions in the full pathway
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* [[ME1]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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* [[ME2]]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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* [[SALCS]]
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* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
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* [[MANpts]]
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** '''22''' reactions found over '''149''' reactions in the full pathway
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* [[GAMpts]]
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* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
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* [[SALSYN]]
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** '''56''' reactions found over '''228''' reactions in the full pathway
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* [[DAPAL]]
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== Reconstruction information  ==
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* [[ACGALpts_manual]]
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* Category: [[orthology]]
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* [[FRUpts2]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[SALCpts]]
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*** Tool: [[pantograph]]
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* [[FRUpts]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[SERD_D]]
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*** Tool: [[pantograph]]
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* [[ALATA_L2]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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* [[ACGApts]]
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*** Tool: [[pantograph]]
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* [[TRPAS1]]
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* [[SUCpts]]
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* [[ALATA_D2]]
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* [[TREpts]]
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* [[EDA]]
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* [[ARBTpts]]
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* [[OAADC]]
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* [[PYK]]
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* [[CELBpts]]
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* [[MNLpts]]
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* [[SERD_L]]
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* [[CYSTL]]
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== Reaction(s) of unknown directionality ==
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* [[AGTi]]
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* [[DDPGALA]]
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* [[ALATA_L]]
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* [[LDH_D]]
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* [[2S6HCCi]]
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* [[LDH_L]]
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== External links  ==
 
== External links  ==
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{{#set: common name=Pyruvate}}
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* RHEA:
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{{#set: consumed by=POX|AEPPT|PFL|DHDPS|PPS|PC|ACLS|DXPS|PDH|ACHBS}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14109 14109]
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{{#set: produced by=L_LACD2|L_LACD3|SHCHCS3|SBTpts|GLCpts|ME1|ME2|SALCS|MANpts|GAMpts|SALSYN|DAPAL|ACGALpts_manual|FRUpts2|SALCpts|FRUpts|SERD_D|ALATA_L2|ACGApts|TRPAS1|SUCpts|ALATA_D2|TREpts|EDA|ARBTpts|OAADC|PYK|CELBpts|MNLpts|SERD_L|CYSTL}}
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* Reactome : REACT_R-ATH-6783955
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{{#set: consumed or produced by=AGTi|DDPGALA|ALATA_L|LDH_D|2S6HCCi|LDH_L}}
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* MetaNetX (MNX) Equation : MNXR102302
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* KEGG Reaction : R01251
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* EC Number : 1.5.1.2
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Pyrroline-5-carboxylate reductase}}
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{{#set: gene associated=EF0961}}
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{{#set: in pathway=map01100|map01130|map01110|map00330|map01230}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 19:40, 18 March 2018

Reaction P5CR

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyrroline-5-carboxylate reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 1-Pyrroline-5-carboxylate[c] + 2.0 H+[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] => 1.0 L-Proline[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • Reactome : REACT_R-ATH-6783955
  • MetaNetX (MNX) Equation : MNXR102302
  • KEGG Reaction : R01251
  • EC Number : 1.5.1.2




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