Difference between revisions of "Tcggrpp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SERD_L SERD_L] == * direction: ** LEFT-TO-RIGHT * common name: ** L-serine deaminase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PHETA1 PHETA1] == * direction: ** REVERSIBLE * common name: ** Phenylalanine transaminase * Synonym...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/SERD_L SERD_L] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PHETA1 PHETA1] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** L-serine deaminase
+
** Phenylalanine transaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ser__L]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[pyr]][c]
+
** 1.0 [[akg]][c] '''+''' 1.0 [[phe__L]][c] '''<=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[phpyr]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Serine[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 Pyruvate[c]
+
** 1.0 2-Oxoglutarate[c] '''+''' 1.0 L-Phenylalanine[c] '''<=>''' 1.0 L-Glutamate[c] '''+''' 1.0 Phenylpyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0099]]
+
* [[EF1793]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF2721]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF0098]]
+
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
* [[EF2722]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
 +
** '''14''' reactions found over '''80''' reactions in the full pathway
 +
* [[map00960]]: [http://www.genome.jp/dbget-bin/www_bget?map00960 map00960]
 +
** '''2''' reactions found over '''27''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''56''' reactions found over '''228''' reactions in the full pathway
 +
* [[map00360]]: [http://www.genome.jp/dbget-bin/www_bget?map00360 map00360]
 +
** '''7''' reactions found over '''109''' reactions in the full pathway
 +
* [[map00350]]: [http://www.genome.jp/dbget-bin/www_bget?map00350 map00350]
 +
** '''9''' reactions found over '''102''' reactions in the full pathway
 +
* [[map00340]]: [http://www.genome.jp/dbget-bin/www_bget?map00340 map00340]
 +
** '''6''' reactions found over '''90''' reactions in the full pathway
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''135''' reactions found over '''694''' reactions in the full pathway
 
** '''135''' reactions found over '''694''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
** '''13''' reactions found over '''59''' reactions in the full pathway
−
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
+
* [[map00401]]: [http://www.genome.jp/dbget-bin/www_bget?map00401 map00401]
−
** '''23''' reactions found over '''133''' reactions in the full pathway
+
** '''2''' reactions found over '''17''' reactions in the full pathway
−
* [[map00290]]: [http://www.genome.jp/dbget-bin/www_bget?map00290 map00290]
+
−
** '''9''' reactions found over '''49''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* BioCyc : META:PHEAMINOTRANS-RXN
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19169 19169]
+
* MetaNetX (MNX) Equation : MNXR102631
−
* BioCyc : META:4.3.1.17-RXN
+
* KEGG Reaction : R00694
−
* MetaNetX (MNX) Equation : MNXR104339
+
* EC Number : 2.6.1.1
−
* KEGG Reaction : R00220
+
{{#set: direction=REVERSIBLE}}
−
* EC Number : 4.3.1.15
+
{{#set: common name=Phenylalanine transaminase}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: gene associated=EF1793}}
−
{{#set: common name=L-serine deaminase}}
+
{{#set: in pathway=map01100|map01110|map01210|map00960|map01230|map00360|map00350|map00340|map01130|map00400|map00401}}
−
{{#set: gene associated=EF0099|EF2721|EF0098|EF2722}}
+
−
{{#set: in pathway=map01100|map01130|map01110|map00260|map00290}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:41, 18 March 2018

Reaction PHETA1

  • direction:
    • REVERSIBLE
  • common name:
    • Phenylalanine transaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2-Oxoglutarate[c] + 1.0 L-Phenylalanine[c] <=> 1.0 L-Glutamate[c] + 1.0 Phenylpyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • BioCyc : META:PHEAMINOTRANS-RXN
  • MetaNetX (MNX) Equation : MNXR102631
  • KEGG Reaction : R00694
  • EC Number : 2.6.1.1




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