Difference between revisions of "Sertrna"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FMETTRS_1 FMETTRS_1] == * direction: ** LEFT-TO-RIGHT * common name: ** Methionyl tRNA formyltransf...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CITL CITL] == * direction: ** LEFT-TO-RIGHT * common name: ** Citrate lyase * Synonym(s): == React...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/CITL CITL] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Citrate lyase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[cit]][c] '''=>''' 1.0 [[oaa]][c] '''+''' 1.0 [[ac]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Citrate[c] '''=>''' 1.0 Oxaloacetate[c] '''+''' 1.0 Acetate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[EF3321]] |
| − | ** [[pantograph]]-[[ | + | ** [[pantograph]]-[[l_plantarum_wcfs1]] |
| + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ||
| + | * [[EF3320]] | ||
| + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
| + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ||
| + | * [[EF3319]] | ||
| + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
| + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ||
| + | * [[EF3318]] | ||
| + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
| + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ||
| + | * [[EF3315]] | ||
| + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
| + | * [[EF3322]] | ||
| + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | * MetaNetX (MNX) Equation : | + | * RHEA: |
| − | * KEGG Reaction : | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10760 10760] |
| − | * EC Number : | + | * BioCyc : META:CITLY-RXN |
| + | * MetaNetX (MNX) Equation : MNXR96731 | ||
| + | * KEGG Reaction : R00362 | ||
| + | * EC Number : 4.1.3.6 | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Citrate lyase}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=EF3321|EF3320|EF3319|EF3318|EF3315|EF3322}} |
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Revision as of 18:41, 18 March 2018
Contents
Reaction CITL
- direction:
- LEFT-TO-RIGHT
- common name:
- Citrate lyase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Citrate[c] => 1.0 Oxaloacetate[c] + 1.0 Acetate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- BioCyc : META:CITLY-RXN
- MetaNetX (MNX) Equation : MNXR96731
- KEGG Reaction : R00362
- EC Number : 4.1.3.6
