Difference between revisions of "Cu2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3OAR180 3OAR180] == * direction: ** REVERSIBLE * common name: ** 3-oxoacyl-[acyl-carrier-protein] r...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GPDDA3 GPDDA3] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerophosphodiester phosphodies...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/3OAR180 3OAR180] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GPDDA3 GPDDA3] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:0)
+
** Glycerophosphodiester phosphodiesterase (Glycerophosphoserine)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h]][c] '''+''' 1.0 [[3ooctdACP]][c] '''+''' 1.0 [[nadph]][c] '''<=>''' 1.0 [[3hoctaACP]][c] '''+''' 1.0 [[nadp]][c]
+
** 1.0 [[g3ps]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[ser__L]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[glyc3p]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[c] '''+''' 1.0 3-Oxooctadecanoyl-[acyl-carrier protein][c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''<=>''' 1.0 (R)-3-Hydroxyoctadecanoyl-[acyl-carrier protein][c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
+
** 1.0 Glycerophosphoserine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 L-Serine[c] '''+''' 1.0 H+[c] '''+''' 1.0 Glycerol 3-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2881]]
+
* [[EF2163]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
* [[EF0779]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
** '''19''' reactions found over '''134''' reactions in the full pathway
−
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
+
−
** '''26''' reactions found over '''67''' reactions in the full pathway
+
−
* [[map01040]]: [http://www.genome.jp/dbget-bin/www_bget?map01040 map01040]
+
−
** '''6''' reactions found over '''42''' reactions in the full pathway
+
−
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
+
−
** '''65''' reactions found over '''160''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR94948
+
* RHEA:
−
* EC Number : 1.1.1.100
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29875 29875]
−
{{#set: direction=REVERSIBLE}}
+
* MetaNetX (MNX) Equation : MNXR100412
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:0)}}
+
* EC Number : 3.1.4.46
−
{{#set: gene associated=EF2881}}
+
* BioCyc : META:RXN-14136
−
{{#set: in pathway=map01100|map00780|map01040|map00061}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Glycerophosphodiester phosphodiesterase (Glycerophosphoserine)}}
 +
{{#set: gene associated=EF2163|EF0779}}
 +
{{#set: in pathway=map00564}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
 

Revision as of 19:41, 18 March 2018

Reaction GPDDA3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycerophosphodiester phosphodiesterase (Glycerophosphoserine)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Glycerophosphoserine[c] + 1.0 H2O H2O[c] => 1.0 L-Serine[c] + 1.0 H+[c] + 1.0 Glycerol 3-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR100412
  • EC Number : 3.1.4.46
  • BioCyc : META:RXN-14136




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