Difference between revisions of "EAR180x"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/G6PDA G6PDA] == * direction: ** LEFT-TO-RIGHT * common name: ** Glucosamine-6-phosphate deaminase *...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_met__L ExchangeSeed_met__L] == * direction: ** REVERSIBLE * Synonym(s): == Reaction F...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/G6PDA G6PDA] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_met__L ExchangeSeed_met__L] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
* common name:
+
** Glucosamine-6-phosphate deaminase
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[gam6p]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[f6p]][c]
+
** 1.0 [[met__L]][C-BOUNDARY] '''<=>''' 1.0 [[met__L]][e]
 
* With common name(s):
 
* With common name(s):
** 1.0 D-Glucosamine 6-phosphate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 D-Fructose 6-phosphate[c]
+
** 1.0 L-Methionine[C-BOUNDARY] '''<=>''' 1.0 L-Methionine[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF0466]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
 
** '''24''' reactions found over '''80''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[manual]]
** [[pantograph]]:
+
** Source: [[manual-import_from_medium]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
*** [[l_plantarum_wcfs1]]
+
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR99905
+
{{#set: direction=REVERSIBLE}}
* KEGG Reaction : R00765
+
{{#set: in pathway=}}
* EC Number : 3.5.99.6
+
{{#set: reconstruction category=manual}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reconstruction source=manual-import_from_medium}}
{{#set: common name=Glucosamine-6-phosphate deaminase}}
+
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
{{#set: gene associated=EF0466}}
+
{{#set: in pathway=map01100|map00520}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+

Revision as of 19:44, 18 March 2018

Reaction ExchangeSeed_met__L

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Methionine[C-BOUNDARY] <=> 1.0 L-Methionine[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links