Difference between revisions of "ADPRDP"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD15 ALDD15] == * direction: ** LEFT-TO-RIGHT * common name: ** Aldehyde dehydrogenase pentadeca...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPS PPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoenolpyruvate synthase * Synonym(...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALDD15 ALDD15] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPS PPS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Aldehyde dehydrogenase  pentadecanal  NAD
+
** Phosphoenolpyruvate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[nad]][c] '''+''' 1.0 [[ptdcal]][c] '''=>''' 1.0 [[nadh]][c] '''+''' 1.0 [[ptdca]][c] '''+''' 2.0 [[h]][c]
+
** 1.0 [[pyr]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 2.0 [[h]][c] '''+''' 1.0 [[pep]][c] '''+''' 1.0 [[amp]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Pentadecanal C15H30O[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 Pentadecanoate  C150  C15H29O2[c] '''+''' 2.0 H+[c]
+
** 1.0 Pyruvate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 H2O H2O[c] '''=>''' 2.0 H+[c] '''+''' 1.0 Phosphoenolpyruvate[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0253]]
+
* [[EF1024]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 +
** '''14''' reactions found over '''157''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''45''' reactions found over '''220''' reactions in the full pathway
 +
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
 +
** '''31''' reactions found over '''163''' reactions in the full pathway
 +
* [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680]
 +
** '''18''' reactions found over '''75''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR95738
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11364 11364]
 +
* BioCyc : META:PEPSYNTH-RXN
 +
* MetaNetX (MNX) Equation : MNXR103140
 +
* KEGG Reaction : R00199
 +
* EC Number : 2.7.9.2
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Aldehyde dehydrogenase  pentadecanal  NAD }}
+
{{#set: common name=Phosphoenolpyruvate synthase}}
−
{{#set: gene associated=EF0253}}
+
{{#set: gene associated=EF1024}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map00720|map01120|map01200|map00620|map00680}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Revision as of 18:44, 18 March 2018

Reaction PPS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphoenolpyruvate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Pyruvate[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 H2O H2O[c] => 2.0 H+[c] + 1.0 Phosphoenolpyruvate[c] + 1.0 AMP C10H12N5O7P[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:PEPSYNTH-RXN
  • MetaNetX (MNX) Equation : MNXR103140
  • KEGG Reaction : R00199
  • EC Number : 2.7.9.2




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