Difference between revisions of "DAAOP"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCLTDx GLYCLTDx] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolate dehydrogenase (NAD)...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PNTK PNTK] == * direction: ** LEFT-TO-RIGHT * common name: ** Pantothenate kinase * Synonym(s): ==...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCLTDx GLYCLTDx] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PNTK PNTK] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glycolate dehydrogenase (NAD)
+
** Pantothenate kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h]][c] '''+''' 1.0 [[glx]][c] '''+''' 1.0 [[nadh]][c] '''=>''' 1.0 [[nad]][c] '''+''' 1.0 [[glyclt]][c]
+
** 1.0 [[pnto__R]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[4ppan]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[c] '''+''' 1.0 Glyoxylate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Glycolate C2H3O3[c]
+
** 1.0 (R)-Pantothenate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 D-4'-Phosphopantothenate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF3141]]
+
* [[EF0168]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
+
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
−
** '''21''' reactions found over '''129''' reactions in the full pathway
+
** '''17''' reactions found over '''75''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
+
−
** '''31''' reactions found over '''163''' reactions in the full pathway
+
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
−
** '''104''' reactions found over '''715''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 2.7.1.33
 +
* BioCyc : META:PANTOTHENATE-KIN-RXN
 +
* MetaNetX (MNX) Equation : MNXR103050
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18229 18229]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16373 16373]
−
* BioCyc : META:GLYCOLATE-REDUCTASE-RXN
+
* Reactome : REACT_R-BTA-196857
−
* MetaNetX (MNX) Equation : MNXR100331
+
* KEGG Reaction : R03018
−
* KEGG Reaction : R00717
+
−
* EC Number : 1.1.1.26
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glycolate dehydrogenase (NAD)}}
+
{{#set: common name=Pantothenate kinase}}
−
{{#set: gene associated=EF3141}}
+
{{#set: gene associated=EF0168}}
−
{{#set: in pathway=map01100|map00630|map01110|map00620|map01120}}
+
{{#set: in pathway=map01100|map00770}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Revision as of 18:44, 18 March 2018

Reaction PNTK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pantothenate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 (R)-Pantothenate[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c] + 1.0 D-4'-Phosphopantothenate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.1.33
  • BioCyc : META:PANTOTHENATE-KIN-RXN
  • MetaNetX (MNX) Equation : MNXR103050
  • RHEA:
  • Reactome : REACT_R-BTA-196857
  • KEGG Reaction : R03018




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