Difference between revisions of "EAR161x"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/IMPD IMPD] == * direction: ** LEFT-TO-RIGHT * common name: ** IMP dehydrogenase * Synonym(s): == R...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FUMt2_2 FUMt2_2] == * direction: ** LEFT-TO-RIGHT * common name: ** Fumarate transport via proton s...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/IMPD IMPD] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/FUMt2_2 FUMt2_2] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** IMP dehydrogenase
+
** Fumarate transport via proton symport (2 H)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[imp]][c] '''+''' 1.0 [[nad]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[xmp]][c]
+
** 2.0 [[h]][e] '''+''' 1.0 [[fum]][e] '''=>''' 2.0 [[h]][c] '''+''' 1.0 [[fum]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 IMP C10H11N4O8P[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 Xanthosine 5'-phosphate[c]
+
** 2.0 H+[e] '''+''' 1.0 Fumarate[e] '''=>''' 2.0 H+[c] '''+''' 1.0 Fumarate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF3293]]
+
* [[EF0387]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
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** 2_reaction_to_add_delete
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
 
−
** '''22''' reactions found over '''72''' reactions in the full pathway
 
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
−
** '''97''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-2_reaction_to_add_delete]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
−
*** [[l_plantarum_wcfs1]]
+
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
−
* EC Number : 1.1.1.205
 
−
* BioCyc : META:IMP-DEHYDROG-RXN
 
−
* MetaNetX (MNX) Equation : MNXR100830
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11708 11708]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29331 29331]
−
* Reactome : REACT_R-ATH-73794
+
* MetaNetX (MNX) Equation : MNXR99711
−
* KEGG Reaction : R01130
+
* BioCyc : META:TRANS-RXN-121B
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=IMP dehydrogenase}}
+
{{#set: common name=Fumarate transport via proton symport (2 H)}}
−
{{#set: gene associated=EF3293}}
+
{{#set: gene associated=EF0387}}
−
{{#set: in pathway=map01100|map01110|map00983|map00230}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=manual-2_reaction_to_add_delete}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}

Revision as of 18:44, 18 March 2018

Reaction FUMt2_2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Fumarate transport via proton symport (2 H)
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 2.0 h[e] + 1.0 fum[e] => 2.0 h[c] + 1.0 fum[c]
  • With common name(s):
    • 2.0 H+[e] + 1.0 Fumarate[e] => 2.0 H+[c] + 1.0 Fumarate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • EF0387
    • 2_reaction_to_add_delete

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR99711
  • BioCyc : META:TRANS-RXN-121B




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