Difference between revisions of "IMPD"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UAG4E UAG4E] == * direction: ** LEFT-TO-RIGHT * common name: ** UDP N acetylglucosamine 4 epimerase...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/LYSTRS LYSTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Lysyl-tRNA synthetase * Synonym(s...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/LYSTRS LYSTRS] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Lysyl-tRNA synthetase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[trnalys]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[lys__L]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[lystrna]][c] '''+''' 1.0 [[ppi]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 TRNA(Lys)[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Lysine[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 L-Lysine-tRNA (Lys)[c] '''+''' 1.0 Diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[EF0268]] |
| − | ** [[pantograph]]-[[ | + | ** [[pantograph]]-[[l_plantarum_wcfs1]] |
| − | + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
| − | ** [[pantograph]]-[[ | + | |
== Pathways == | == Pathways == | ||
| + | * [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970] | ||
| + | ** '''23''' reactions found over '''49''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | * MetaNetX (MNX) Equation : | + | * Reactome : REACT_R-HSA-380008 |
| + | * MetaNetX (MNX) Equation : MNXR101264 | ||
| + | * KEGG Reaction : R03658 | ||
| + | * EC Number : 6.1.1.6 | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Lysyl-tRNA synthetase}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=EF0268}} |
| − | {{#set: in pathway=}} | + | {{#set: in pathway=map00970}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Revision as of 18:45, 18 March 2018
Contents
Reaction LYSTRS
- direction:
- LEFT-TO-RIGHT
- common name:
- Lysyl-tRNA synthetase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 TRNA(Lys)[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 L-Lysine[c] => 1.0 AMP C10H12N5O7P[c] + 1.0 L-Lysine-tRNA (Lys)[c] + 1.0 Diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- Reactome : REACT_R-HSA-380008
- MetaNetX (MNX) Equation : MNXR101264
- KEGG Reaction : R03658
- EC Number : 6.1.1.6
