Difference between revisions of "CITt15"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FORt2 FORt2] == * direction: ** REVERSIBLE * common name: ** Formate transport in via proton sympor...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MTHFD MTHFD] == * direction: ** REVERSIBLE * common name: ** Methylenetetrahydrofolate dehydrogenas...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/FORt2 FORt2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/MTHFD MTHFD] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** Formate transport in via proton symport
+
** Methylenetetrahydrofolate dehydrogenase (NADP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[for]][e] '''+''' 1.0 [[h]][e] '''<=>''' 1.0 [[for]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[mlthf]][c] '''+''' 1.0 [[nadp]][c] '''<=>''' 1.0 [[methf]][c] '''+''' 1.0 [[nadph]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Formate[e] '''+''' 1.0 H+[e] '''<=>''' 1.0 Formate[c] '''+''' 1.0 H+[c]
+
** 1.0 5,10-Methylenetetrahydrofolate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''<=>''' 1.0 5,10-Methenyltetrahydrofolate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0094]]
+
* [[EF0978]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''45''' reactions found over '''220''' reactions in the full pathway
 +
* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
 +
** '''14''' reactions found over '''65''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 +
** '''14''' reactions found over '''157''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR99621
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22812 22812]
 +
* MetaNetX (MNX) Equation : MNXR101749
 +
* KEGG Reaction : R01220
 +
* EC Number : 1.5.1.5
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Formate transport in via proton symport}}
+
{{#set: common name=Methylenetetrahydrofolate dehydrogenase (NADP)}}
−
{{#set: gene associated=EF0094}}
+
{{#set: gene associated=EF0978}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map01200|map00670|map01120|map00720}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Revision as of 19:45, 18 March 2018

Reaction MTHFD

  • direction:
    • REVERSIBLE
  • common name:
    • Methylenetetrahydrofolate dehydrogenase (NADP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 5,10-Methylenetetrahydrofolate[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c] <=> 1.0 5,10-Methenyltetrahydrofolate[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR101749
  • KEGG Reaction : R01220
  • EC Number : 1.5.1.5




Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=CITt15&oldid=8321"