Difference between revisions of "DXYLK"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PRFGS PRFGS] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoribosylformylglycinamidine s...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PYNP2r PYNP2r] == * direction: ** REVERSIBLE * common name: ** Pyrimidine-nucleoside phosphorylase...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PRFGS PRFGS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PYNP2r PYNP2r] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Phosphoribosylformylglycinamidine synthase
+
** Pyrimidine-nucleoside phosphorylase (uracil)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[fgam]][c] '''+''' 1.0 [[gln__L]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[glu__L]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[fpram]][c]
+
** 1.0 [[pi]][c] '''+''' 1.0 [[uri]][c] '''<=>''' 1.0 [[ura]][c] '''+''' 1.0 [[r1p]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide[c] '''+''' 1.0 L-Glutamine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 L-Glutamate[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine[c]
+
** 1.0 Phosphate[c] '''+''' 1.0 Uridine[c] '''<=>''' 1.0 Uracil[c] '''+''' 1.0 Alpha-D-Ribose 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1783]]
+
* [[EF0173]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
−
* [[EF1782]]
+
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
−
* [[EF1784]]
+
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
−
** '''135''' reactions found over '''694''' reactions in the full pathway
+
** '''22''' reactions found over '''72''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
−
** '''97''' reactions found over '''298''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17129 17129]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24388 24388]
−
* MetaNetX (MNX) Equation : MNXR103165
+
* BioCyc : META:URPHOS-RXN
−
* EC Number : 6.3.5.3
+
* MetaNetX (MNX) Equation : MNXR103377
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* KEGG Reaction : R01876
−
{{#set: common name=Phosphoribosylformylglycinamidine synthase}}
+
* EC Number : 2.4.2.2
−
{{#set: gene associated=EF1783|EF1782|EF1784}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: in pathway=map01100|map01130|map01110|map00230}}
+
{{#set: common name=Pyrimidine-nucleoside phosphorylase (uracil)}}
 +
{{#set: gene associated=EF0173}}
 +
{{#set: in pathway=map00240|map01100|map00983}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
 

Revision as of 19:45, 18 March 2018

Reaction PYNP2r

  • direction:
    • REVERSIBLE
  • common name:
    • Pyrimidine-nucleoside phosphorylase (uracil)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Phosphate[c] + 1.0 Uridine[c] <=> 1.0 Uracil[c] + 1.0 Alpha-D-Ribose 1-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:URPHOS-RXN
  • MetaNetX (MNX) Equation : MNXR103377
  • KEGG Reaction : R01876
  • EC Number : 2.4.2.2




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