Difference between revisions of "PNP"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NOX NOX] == * direction: ** LEFT-TO-RIGHT * common name: ** NADH oxidase * Synonym(s): == Reaction...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SELCYSS SELCYSS] == * direction: ** LEFT-TO-RIGHT * common name: ** Selenocysteine synthase * Synon...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NOX NOX] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SELCYSS SELCYSS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** NADH oxidase
+
** Selenocysteine synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[o2]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c] '''=>''' 1.0 [[nad]][c] '''+''' 1.0 [[h2o2]][c]
+
** 1.0 [[sertrna_sec]][c] '''+''' 1.0 [[selnp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[sectrna]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 O2 O2[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Hydrogen peroxide[c]
+
** 1.0 L-Seryl-tRNA(Sec)[c] '''+''' 1.0 Selenophosphate[c] '''=>''' 1.0 H+[c] '''+''' 1.0 L-Selenocysteinyl-tRNA(Sec)[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1586]]
+
* [[EF0838]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
* [[EF2989]]
+
* [[EF2976]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00450]]: [http://www.genome.jp/dbget-bin/www_bget?map00450 map00450]
 +
** '''6''' reactions found over '''35''' reactions in the full pathway
 +
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
 +
** '''23''' reactions found over '''49''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR104314
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11264 11264]
+
* KEGG Reaction : R08219
* BioCyc : META:RXN-14691
+
* EC Number : 2.9.1.1
* MetaNetX (MNX) Equation : MNXR102010
+
* KEGG Reaction : R07171
+
* EC Number : 1.6.3.1
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=NADH oxidase}}
+
{{#set: common name=Selenocysteine synthase}}
{{#set: gene associated=EF1586|EF2989}}
+
{{#set: gene associated=EF0838|EF2976}}
{{#set: in pathway=}}
+
{{#set: in pathway=map00450|map00970}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=l_plantarum_wcfs1}}
 

Revision as of 18:45, 18 March 2018

Reaction SELCYSS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Selenocysteine synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Seryl-tRNA(Sec)[c] + 1.0 Selenophosphate[c] => 1.0 H+[c] + 1.0 L-Selenocysteinyl-tRNA(Sec)[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR104314
  • KEGG Reaction : R08219
  • EC Number : 2.9.1.1