Difference between revisions of "BWCOGDS1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/L_LACD3 L_LACD3] == * direction: ** LEFT-TO-RIGHT * common name: ** L-Lactate dehydrogenase (menaqu...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGK PGK] == * direction: ** REVERSIBLE * common name: ** Phosphoglycerate kinase * Synonym(s): ==...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/L_LACD3 L_LACD3] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PGK PGK] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** L-Lactate dehydrogenase (menaquinone)
+
** Phosphoglycerate kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[mqn8]][c] '''+''' 1.0 [[lac__L]][c] '''=>''' 1.0 [[mql8]][c] '''+''' 1.0 [[pyr]][c]
+
** 1.0 [[3pg]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[13dpg]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Menaquinone 8[c] '''+''' 1.0 L-Lactate[c] '''=>''' 1.0 Menaquinol 8[c] '''+''' 1.0 Pyruvate[c]
+
** 1.0 3-Phospho-D-glycerate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 3-Phospho-D-glyceroyl phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1109]]
+
* [[EF1963]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
−
* [[EF1110]]
+
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
−
* [[EF1108]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''31''' reactions found over '''163''' reactions in the full pathway
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''45''' reactions found over '''220''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''56''' reactions found over '''228''' reactions in the full pathway
 +
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 +
** '''24''' reactions found over '''149''' reactions in the full pathway
 +
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
 +
** '''16''' reactions found over '''71''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR101275
+
* EC Number : 2.7.2.3
−
* EC Number : 1.1.2.3
+
* BioCyc : META:PHOSGLYPHOS-RXN
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* MetaNetX (MNX) Equation : MNXR102538
−
{{#set: common name=L-Lactate dehydrogenase (menaquinone)}}
+
* RHEA:
−
{{#set: gene associated=EF1109|EF1110|EF1108}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14801 14801]
−
{{#set: in pathway=map01100|map00620}}
+
* Reactome : REACT_R-ATH-70486
 +
* KEGG Reaction : R01512
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Phosphoglycerate kinase}}
 +
{{#set: gene associated=EF1963}}
 +
{{#set: in pathway=map01100|map01110|map01120|map01200|map01230|map00010|map00710|map01130}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Revision as of 18:45, 18 March 2018

Reaction PGK

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphoglycerate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 3-Phospho-D-glycerate[c] + 1.0 ATP C10H12N5O13P3[c] <=> 1.0 ADP C10H12N5O10P2[c] + 1.0 3-Phospho-D-glyceroyl phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.2.3
  • BioCyc : META:PHOSGLYPHOS-RXN
  • MetaNetX (MNX) Equation : MNXR102538
  • RHEA:
  • Reactome : REACT_R-ATH-70486
  • KEGG Reaction : R01512




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