Difference between revisions of "ALDD14"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TDPGDH TDPGDH] == * direction: ** LEFT-TO-RIGHT * common name: ** DTDPglucose 4,6-dehydratase * Syn...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_trp__L TransportSeed_trp__L] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == React...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TDPGDH TDPGDH] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_trp__L TransportSeed_trp__L] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** DTDPglucose 4,6-dehydratase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[dtdpglu]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[dtdp4d6dg]][c]
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** 1.0 [[trp__L]][e] '''=>''' 1.0 [[trp__L]][c]
 
* With common name(s):
 
* With common name(s):
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** 1.0 DTDPglucose[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 DTDP-4-dehydro-6-deoxy-D-glucose[c]
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** 1.0 L-Tryptophan[e] '''=>''' 1.0 L-Tryptophan[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF2192]]
 
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** [[pantograph]]-[[l_plantarum_wcfs1]]
 
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
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* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
 
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** '''7''' reactions found over '''14''' reactions in the full pathway
 
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
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** '''135''' reactions found over '''694''' reactions in the full pathway
 
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* [[map00523]]: [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
 
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** '''4''' reactions found over '''4''' reactions in the full pathway
 
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* [[map00525]]: [http://www.genome.jp/dbget-bin/www_bget?map00525 map00525]
 
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** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[map01055]]: [http://www.genome.jp/dbget-bin/www_bget?map01055 map01055]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[manual]]
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** [[pantograph]]:
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** Source: [[manual-import_from_medium]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[added to manage seeds from extracellular to cytosol compartment]]
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*** [[l_plantarum_wcfs1]]
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== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17221 17221]
 
−
* BioCyc : META:DTDPGLUCDEHYDRAT-RXN
 
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* MetaNetX (MNX) Equation : MNXR104761
 
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* KEGG Reaction : R06513
 
−
* EC Number : 4.2.1.46
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=DTDPglucose 4,6-dehydratase}}
+
{{#set: in pathway=}}
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{{#set: gene associated=EF2192}}
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{{#set: reconstruction category=manual}}
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{{#set: in pathway=map00521|map01130|map00523|map00525|map01055}}
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{{#set: reconstruction source=manual-import_from_medium}}
−
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
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{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
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Revision as of 18:46, 18 March 2018

Reaction TransportSeed_trp__L

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Tryptophan[e] => 1.0 L-Tryptophan[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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