Difference between revisions of "TransportSeed val L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SERD_D SERD_D] == * direction: ** LEFT-TO-RIGHT * common name: ** D-serine deaminase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UAG2EMA UAG2EMA] == * direction: ** REVERSIBLE * common name: ** UDP-N-acetyl-D-glucosamine 2-epime...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/SERD_D SERD_D] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/UAG2EMA UAG2EMA] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** D-serine deaminase
+
** UDP-N-acetyl-D-glucosamine 2-epimerase (Hydrolysis)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[ser__D]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[pyr]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[uacgam]][c] '''<=>''' 1.0 [[udp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[acmana]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 D-Serine[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 Pyruvate[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 UDP-N-acetyl-D-glucosamine[c] '''<=>''' 1.0 UDP C9H11N2O12P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 N-Acetyl-D-mannosamine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2579]]
+
* [[EF2917]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
** '''23''' reactions found over '''133''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
 +
** '''24''' reactions found over '''80''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13977 13977]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30683 30683]
* BioCyc : META:DSERDEAM-RXN
+
* Reactome : REACT_R-BTA-4085021
* MetaNetX (MNX) Equation : MNXR104338
+
* MetaNetX (MNX) Equation : MNXR105025
* KEGG Reaction : R00221
+
* KEGG Reaction : R00414
* EC Number : 4.3.1.18
+
* EC Number : 3.2.1.183
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
{{#set: common name=D-serine deaminase}}
+
{{#set: common name=UDP-N-acetyl-D-glucosamine 2-epimerase (Hydrolysis)}}
{{#set: gene associated=EF2579}}
+
{{#set: gene associated=EF2917}}
{{#set: in pathway=map00260}}
+
{{#set: in pathway=map01100|map00520}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=l_plantarum_wcfs1}}
 

Revision as of 19:46, 18 March 2018

Reaction UAG2EMA

  • direction:
    • REVERSIBLE
  • common name:
    • UDP-N-acetyl-D-glucosamine 2-epimerase (Hydrolysis)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 UDP-N-acetyl-D-glucosamine[c] <=> 1.0 UDP C9H11N2O12P2[c] + 1.0 H+[c] + 1.0 N-Acetyl-D-mannosamine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • Reactome : REACT_R-BTA-4085021
  • MetaNetX (MNX) Equation : MNXR105025
  • KEGG Reaction : R00414
  • EC Number : 3.2.1.183