Difference between revisions of "E4PD"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_lys__L ExchangeSeed_lys__L] == * direction: ** REVERSIBLE * Synonym(s): == Reaction F...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGMT PGMT] == * direction: ** REVERSIBLE * common name: ** Phosphoglucomutase * Synonym(s): == Rea...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_lys__L ExchangeSeed_lys__L] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PGMT PGMT] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* common name:
 +
** Phosphoglucomutase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[lys__L]][C-BOUNDARY] '''<=>''' 1.0 [[lys__L]][e]
+
** 1.0 [[g1p]][c] '''<=>''' 1.0 [[g6p]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 L-Lysine[C-BOUNDARY] '''<=>''' 1.0 L-Lysine[e]
+
** 1.0 D-Glucose 1-phosphate[c] '''<=>''' 1.0 D-Glucose 6-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0369]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
* [[EF0677]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF2425]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
 +
** '''7''' reactions found over '''14''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00500]]: [http://www.genome.jp/dbget-bin/www_bget?map00500 map00500]
 +
** '''15''' reactions found over '''81''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
 +
** '''24''' reactions found over '''80''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[added to manage seeds from boundary to extracellular compartment]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* BioCyc : META:PHOSPHOGLUCMUT-RXN
 +
* MetaNetX (MNX) Equation : MNXR102548
 +
* KEGG Reaction : R08639
 +
* EC Number : 5.4.2.2
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: in pathway=}}
+
{{#set: common name=Phosphoglucomutase}}
{{#set: reconstruction category=manual}}
+
{{#set: gene associated=EF0369|EF0677|EF2425}}
{{#set: reconstruction source=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: in pathway=map00521|map01130|map00500|map01110|map00520}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 18:46, 18 March 2018

Reaction PGMT

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphoglucomutase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Glucose 1-phosphate[c] <=> 1.0 D-Glucose 6-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • BioCyc : META:PHOSPHOGLUCMUT-RXN
  • MetaNetX (MNX) Equation : MNXR102548
  • KEGG Reaction : R08639
  • EC Number : 5.4.2.2