Difference between revisions of "MDH"

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(Created page with "Category:Gene == Gene EF2401 == * Synonym(s): == Reactions associated == * ACYP_2 ** pantograph-l_plantarum_wcfs1 * APH120 ** pantograph-e_coli_sstr...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MDH MDH] == * direction: ** REVERSIBLE * common name: ** Malate dehydrogenase * Synonym(s): == Rea...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene EF2401 ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/MDH MDH] ==
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* direction:
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** REVERSIBLE
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* common name:
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** Malate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ACYP_2]]
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* With identifiers:
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** 1.0 [[nad]][c] '''+''' 1.0 [[mal__L]][c] '''<=>''' 1.0 [[nadh]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[oaa]][c]
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* [[APH120]]
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* With common name(s):
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 L-Malate[c] '''<=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 H+[c] '''+''' 1.0 Oxaloacetate[c]
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* [[APH140]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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== Genes associated with this reaction  ==
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* [[APH141]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* Gene: [[EF0641]]
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* [[APH160]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* Gene: [[EF0255]]
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* [[APH161]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* Gene: [[EF0388]]
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* [[APH180]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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== Pathways  ==
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* [[APH181]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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== Pathways associated ==
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* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
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* [[map00627]]
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** '''21''' reactions found over '''129''' reactions in the full pathway
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* [[map00620]]
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* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
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* [[map01120]]
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** '''14''' reactions found over '''157''' reactions in the full pathway
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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** '''104''' reactions found over '''715''' reactions in the full pathway
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* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
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** '''25''' reactions found over '''135''' reactions in the full pathway
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* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
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** '''45''' reactions found over '''220''' reactions in the full pathway
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* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
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** '''16''' reactions found over '''71''' reactions in the full pathway
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* [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680]
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** '''18''' reactions found over '''75''' reactions in the full pathway
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
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** '''31''' reactions found over '''163''' reactions in the full pathway
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* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
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** '''4''' reactions found over '''70''' reactions in the full pathway
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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** '''135''' reactions found over '''694''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: reaction associated=ACYP_2|APH120|APH140|APH141|APH160|APH161|APH180|APH181}}
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* EC Number : 1.1.1.299
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{{#set: pathway associated=map00627|map00620|map01120}}
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* BioCyc : META:MALATE-DEH-RXN
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* MetaNetX (MNX) Equation : MNXR101439
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21432 21432]
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* Reactome : REACT_R-ATH-70979
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* KEGG Reaction : R00342
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Malate dehydrogenase}}
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{{#set: gene associated=EF0641|EF0255|EF0388}}
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{{#set: in pathway=map01100|map00630|map00720|map01120|map00270|map01200|map00710|map00680|map01110|map00620|map00020|map01130}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:10, 21 March 2018

Reaction MDH

  • direction:
    • REVERSIBLE
  • common name:
    • Malate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 L-Malate[c] <=> 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 H+[c] + 1.0 Oxaloacetate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 1.1.1.299
  • BioCyc : META:MALATE-DEH-RXN
  • MetaNetX (MNX) Equation : MNXR101439
  • RHEA:
  • Reactome : REACT_R-ATH-70979
  • KEGG Reaction : R00342




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