Difference between revisions of "GLYBabc"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/4h2oglt 4h2oglt] == * common name: ** 4 Hydroxy 2 oxoglutarate C5H4O6 * Synonym(s): == React...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYBabc GLYBabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycine betaine transport via A...")
 
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/4h2oglt 4h2oglt] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYBabc GLYBabc] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 4 Hydroxy 2 oxoglutarate C5H4O6
+
** Glycine betaine transport via ABC system
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[EHGLAT]]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[glyb]][e] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[glyb]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Glycine betaine[e] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Glycine betaine[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF0675]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
* Gene: [[EF0864]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF0865]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF0862]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF0674]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
* Gene: [[EF0863]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=4 Hydroxy 2 oxoglutarate C5H4O6}}
+
* RHEA:
−
{{#set: produced by=EHGLAT}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32783#1 32783#1]
 +
* MetaNetX (MNX) Equation : MNXR100314
 +
* BioCyc : META:TRANS-RXN-283
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Glycine betaine transport via ABC system}}
 +
{{#set: gene associated=EF0675|EF0864|EF0865|EF0862|EF0674|EF0863}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:17, 21 March 2018

Reaction GLYBabc

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycine betaine transport via ABC system
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Glycine betaine[e] + 1.0 H2O H2O[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 Glycine betaine[c] + 1.0 Phosphate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR100314
  • BioCyc : META:TRANS-RXN-283




Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=GLYBabc&oldid=9470"