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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/PDH PDH] == | + | == Metabolite [http://bigg.ucsd.edu/universal/metabolites/25dkglcn 25dkglcn] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** Pyruvate dehydrogenase | + | ** 2,5-diketo-D-gluconate |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | * [[DKGLCNR1]] |
| − | ** 1.0 [[nad]][c] '''+''' 1.0 [[coa]][c] '''+''' 1.0 [[pyr]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[accoa]][c]
| + | * [[DKGLCNR2y]] |
| − | * With common name(s):
| + | * [[DKGLCNR2x]] |
| − | ** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Coenzyme A[c] '''+''' 1.0 Pyruvate[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 Acetyl-CoA[c]
| + | == Reaction(s) known to produce the compound == |
| − | | + | == Reaction(s) of unknown directionality == |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[EF1353]] | + | |
| − | ** [[pantograph]]-[[l_plantarum_wcfs1]]
| + | |
| − | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
| + | |
| − | * [[EF1356]]
| + | |
| − | ** [[pantograph]]-[[l_plantarum_wcfs1]]
| + | |
| − | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
| + | |
| − | * [[EF1355]]
| + | |
| − | ** [[pantograph]]-[[l_plantarum_wcfs1]]
| + | |
| − | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
| + | |
| − | * [[EF1354]]
| + | |
| − | ** [[pantograph]]-[[l_plantarum_wcfs1]]
| + | |
| − | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
| + | |
| − | == Pathways == | + | |
| − | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
| + | |
| − | ** '''460''' reactions found over '''2349''' reactions in the full pathway
| + | |
| − | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
| + | |
| − | ** '''179''' reactions found over '''1054''' reactions in the full pathway
| + | |
| − | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
| + | |
| − | ** '''104''' reactions found over '''715''' reactions in the full pathway
| + | |
| − | * [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
| + | |
| − | ** '''45''' reactions found over '''220''' reactions in the full pathway
| + | |
| − | * [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
| + | |
| − | ** '''31''' reactions found over '''163''' reactions in the full pathway
| + | |
| − | * [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
| + | |
| − | ** '''24''' reactions found over '''149''' reactions in the full pathway
| + | |
| − | * [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
| + | |
| − | ** '''4''' reactions found over '''70''' reactions in the full pathway
| + | |
| − | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
| + | |
| − | ** '''135''' reactions found over '''694''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | ** Source: [[orthology-l_plantarum_wcfs1]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| | == External links == | | == External links == |
| − | * EC Number : 1.2.1
| + | {{#set: common name=2,5-diketo-D-gluconate}} |
| − | * BioCyc : META:PYRUVDEH-RXN
| + | {{#set: consumed by=DKGLCNR1|DKGLCNR2y|DKGLCNR2x}} |
| − | * MetaNetX (MNX) Equation : MNXR102425
| + | |
| − | * RHEA:
| + | |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28042 28042]
| + | |
| − | * Reactome : REACT_R-ATH-71397
| + | |
| − | * KEGG Reaction : R00209
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=Pyruvate dehydrogenase}} | + | |
| − | {{#set: gene associated=EF1353|EF1356|EF1355|EF1354}}
| + | |
| − | {{#set: in pathway=map01100|map01110|map01120|map01200|map00620|map00010|map00020|map01130}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
