Difference between revisions of "2dmmql8"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TRPTA TRPTA] == * direction: ** REVERSIBLE * common name: ** Tryptophan transaminase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPAKr PPAKr] == * direction: ** REVERSIBLE * common name: ** Propionate kinase * Synonym(s): == Re...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/TRPTA TRPTA] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPAKr PPAKr] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
** Tryptophan transaminase
+
** Propionate kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[akg]][c] '''+''' 1.0 [[trp__L]][c] '''<=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[indpyr]][c]
+
** 1.0 [[adp]][c] '''+''' 1.0 [[ppap]][c] '''<=>''' 1.0 [[ppa]][c] '''+''' 1.0 [[atp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 2-Oxoglutarate[c] '''+''' 1.0 L-Tryptophan[c] '''<=>''' 1.0 L-Glutamate[c] '''+''' 1.0 Indolepyruvate C11H8NO3[c]
+
** 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Propanoyl phosphate[c] '''<=>''' 1.0 Propionate (n-C3:0)[c] '''+''' 1.0 ATP C10H12N5O13P3[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1706]]
+
* [[EF1983]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[map00380]]: [http://www.genome.jp/dbget-bin/www_bget?map00380 map00380]
+
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
** '''7''' reactions found over '''163''' reactions in the full pathway
+
** '''15''' reactions found over '''143''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR95897
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14093 14093]
+
* EC Number : 2.7.2.15
* BioCyc : META:TRYPTOPHAN-AMINOTRANSFERASE-RXN
+
* MetaNetX (MNX) Equation : MNXR104947
+
* KEGG Reaction : R00684
+
* EC Number : 2.6.1.27
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: common name=Tryptophan transaminase}}
+
{{#set: common name=Propionate kinase}}
{{#set: gene associated=EF1706}}
+
{{#set: gene associated=EF1983}}
{{#set: in pathway=map01100|map00380}}
+
{{#set: in pathway=map01100|map00640}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=l_plantarum_wcfs1}}
 

Revision as of 19:39, 18 March 2018

Reaction PPAKr

  • direction:
    • REVERSIBLE
  • common name:
    • Propionate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ADP C10H12N5O10P2[c] + 1.0 Propanoyl phosphate[c] <=> 1.0 Propionate (n-C3:0)[c] + 1.0 ATP C10H12N5O13P3[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR95897
  • EC Number : 2.7.2.15