Difference between revisions of "ACCOAC"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ASNS2 ASNS2] == * direction: ** LEFT-TO-RIGHT * common name: ** Asparagine synthetase * Synonym(s):...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACCOAC ACCOAC] == * direction: ** LEFT-TO-RIGHT * common name: ** Acetyl-CoA carboxylase * Synonym(...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ASNS2 ASNS2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACCOAC ACCOAC] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Asparagine synthetase
+
** Acetyl-CoA carboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[asp__L]][c] '''+''' 1.0 [[nh4]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[asn__L]][c] '''+''' 1.0 [[amp]][c]
+
** 1.0 [[accoa]][c] '''+''' 1.0 [[hco3]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[malcoa]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Aspartate[c] '''+''' 1.0 Ammonium[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 L-Asparagine[c] '''+''' 1.0 AMP C10H12N5O7P[c]
+
** 1.0 Acetyl-CoA[c] '''+''' 1.0 Bicarbonate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Malonyl CoA C24H33N7O19P3S[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF2877]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF2876]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF2879]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF3240]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF2875]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00460]]: [http://www.genome.jp/dbget-bin/www_bget?map00460 map00460]
+
−
** '''2''' reactions found over '''14''' reactions in the full pathway
+
−
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
+
−
** '''27''' reactions found over '''93''' reactions in the full pathway
+
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
 +
** '''15''' reactions found over '''143''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
 +
** '''36''' reactions found over '''182''' reactions in the full pathway
 +
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 +
** '''14''' reactions found over '''157''' reactions in the full pathway
 +
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
 +
** '''31''' reactions found over '''163''' reactions in the full pathway
 +
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
 +
** '''65''' reactions found over '''160''' reactions in the full pathway
 +
* [[map00254]]: [http://www.genome.jp/dbget-bin/www_bget?map00254 map00254]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''45''' reactions found over '''220''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11372 11372]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11308 11308]
−
* EC Number : 6.3.1.1
+
* BioCyc : META:ACETYL-COA-CARBOXYLTRANSFER-RXN
−
* MetaNetX (MNX) Equation : MNXR96060
+
* MetaNetX (MNX) Equation : MNXR95219
−
* KEGG Reaction : R00483
+
* KEGG Reaction : R00742
−
* BioCyc : META:ASNSYNA-RXN
+
* EC Number : 6.4.1.2
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Asparagine synthetase}}
+
{{#set: common name=Acetyl-CoA carboxylase}}
−
{{#set: in pathway=map01100|map00460|map00250|map01110}}
+
{{#set: gene associated=EF2877|EF2876|EF2879|EF3240|EF2875}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=map01100|map01110|map00640|map01120|map01212|map00720|map00620|map00061|map00254|map01200|map01130}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:17, 21 March 2018

Reaction ACCOAC

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Acetyl-CoA carboxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Acetyl-CoA[c] + 1.0 Bicarbonate[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 Phosphate[c] + 1.0 H+[c] + 1.0 Malonyl CoA C24H33N7O19P3S[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:ACETYL-COA-CARBOXYLTRANSFER-RXN
  • MetaNetX (MNX) Equation : MNXR95219
  • KEGG Reaction : R00742
  • EC Number : 6.4.1.2




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