Difference between revisions of "AGTi"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CRNDCAL2 CRNDCAL2] == * direction: ** LEFT-TO-RIGHT * common name: ** D-Carnitine-CoA Ligase * Syno...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AGTi AGTi] == * direction: ** REVERSIBLE * common name: ** Alanine glyoxylate aminotransferase irr...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/CRNDCAL2 CRNDCAL2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/AGTi AGTi] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** D-Carnitine-CoA Ligase
+
** Alanine glyoxylate aminotransferase  irreversible
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[crn__D]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[coa]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[crnDcoa]][c] '''+''' 1.0 [[pi]][c]
+
** 1.0 [[glx]][c] '''+''' 1.0 [[ala__L]][c] '''<=>''' 1.0 [[pyr]][c] '''+''' 1.0 [[gly]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 D-Carnitine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Coenzyme A[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 D-carnitinyl-CoA[c] '''+''' 1.0 Phosphate[c]
+
** 1.0 Glyoxylate[c] '''+''' 1.0 L-Alanine[c] '''<=>''' 1.0 Pyruvate[c] '''+''' 1.0 Glycine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF0446]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 +
** '''25''' reactions found over '''135''' reactions in the full pathway
 +
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
 +
** '''22''' reactions found over '''93''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
 +
** '''23''' reactions found over '''133''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[gap-filling]]
−
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 2.6.1.44
 +
* BioCyc : META:ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN
 +
* MetaNetX (MNX) Equation : MNXR95618
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30543 30543]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24248 24248]
−
* MetaNetX (MNX) Equation : MNXR96901
+
* Reactome : REACT_R-ATH-904864
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* KEGG Reaction : R00369
−
{{#set: common name=D-Carnitine-CoA Ligase}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: gene associated=EF0446}}
+
{{#set: common name=Alanine glyoxylate aminotransferase  irreversible }}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map00270|map00250|map01110|map00260}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:38, 21 March 2018

Reaction AGTi

  • direction:
    • REVERSIBLE
  • common name:
    • Alanine glyoxylate aminotransferase irreversible
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Glyoxylate[c] + 1.0 L-Alanine[c] <=> 1.0 Pyruvate[c] + 1.0 Glycine[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • EC Number : 2.6.1.44
  • BioCyc : META:ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN
  • MetaNetX (MNX) Equation : MNXR95618
  • RHEA:
  • Reactome : REACT_R-ATH-904864
  • KEGG Reaction : R00369




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