Difference between revisions of "AICART"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/but but] == * common name: ** Butyrate (n-C4:0) * Synonym(s): == Reaction(s) known to consum...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PDH PDH] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyruvate dehydrogenase * Synonym(s): =...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/PDH PDH] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Pyruvate dehydrogenase |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | == | + | * With identifiers: |
| − | * [[ | + | ** 1.0 [[nad]][c] '''+''' 1.0 [[coa]][c] '''+''' 1.0 [[pyr]][c] '''=>''' 1.0 [[accoa]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[co2]][c] |
| − | == | + | * With common name(s): |
| − | * [[ | + | ** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Coenzyme A[c] '''+''' 1.0 Pyruvate[c] '''=>''' 1.0 Acetyl-CoA[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 CO2 CO2[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[EF1353]] | ||
| + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
| + | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
| + | * [[EF1355]] | ||
| + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
| + | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
| + | * [[EF1356]] | ||
| + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
| + | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
| + | * [[EF1354]] | ||
| + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
| + | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
| + | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''179''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120] | ||
| + | ** '''104''' reactions found over '''715''' reactions in the full pathway | ||
| + | * [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200] | ||
| + | ** '''45''' reactions found over '''220''' reactions in the full pathway | ||
| + | * [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620] | ||
| + | ** '''31''' reactions found over '''163''' reactions in the full pathway | ||
| + | * [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010] | ||
| + | ** '''24''' reactions found over '''149''' reactions in the full pathway | ||
| + | * [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020] | ||
| + | ** '''4''' reactions found over '''70''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''135''' reactions found over '''694''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * [[orthology]]: | ||
| + | ** [[pantograph]]: | ||
| + | *** [[l_plantarum_wcfs1]] | ||
| + | *** [[b_subtilis_subsp_subtilis_str168]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * EC Number : 1.2.1 |
| − | {{#set: | + | * BioCyc : META:PYRUVDEH-RXN |
| − | {{#set: | + | * MetaNetX (MNX) Equation : MNXR102425 |
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28042 28042] | ||
| + | * Reactome : REACT_R-ATH-71397 | ||
| + | * KEGG Reaction : R00209 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Pyruvate dehydrogenase}} | ||
| + | {{#set: gene associated=EF1353|EF1355|EF1356|EF1354}} | ||
| + | {{#set: in pathway=map01100|map01110|map01120|map01200|map00620|map00010|map00020|map01130}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
| + | {{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}} | ||
Revision as of 17:05, 10 January 2018
Contents
Reaction PDH
- direction:
- LEFT-TO-RIGHT
- common name:
- Pyruvate dehydrogenase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 Coenzyme A[c] + 1.0 Pyruvate[c] => 1.0 Acetyl-CoA[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 CO2 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map01120: map01120
- 104 reactions found over 715 reactions in the full pathway
- map01200: map01200
- 45 reactions found over 220 reactions in the full pathway
- map00620: map00620
- 31 reactions found over 163 reactions in the full pathway
- map00010: map00010
- 24 reactions found over 149 reactions in the full pathway
- map00020: map00020
- 4 reactions found over 70 reactions in the full pathway
- map01130: map01130
- 135 reactions found over 694 reactions in the full pathway
Reconstruction information
External links
- EC Number : 1.2.1
- BioCyc : META:PYRUVDEH-RXN
- MetaNetX (MNX) Equation : MNXR102425
- RHEA:
- Reactome : REACT_R-ATH-71397
- KEGG Reaction : R00209
