Difference between revisions of "APH160"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DRPA DRPA] == * direction: ** LEFT-TO-RIGHT * common name: ** Deoxyribose-phosphate aldolase * Syno...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_lys__L ExchangeSeed_lys__L] == * direction: ** REVERSIBLE * Synonym(s): == Reaction F...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/DRPA DRPA] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_lys__L ExchangeSeed_lys__L] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
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** REVERSIBLE
* common name:
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** Deoxyribose-phosphate aldolase
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[2dr5p]][c] '''=>''' 1.0 [[acald]][c] '''+''' 1.0 [[g3p]][c]
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** 1.0 [[lys__L]][C-BOUNDARY] '''<=>''' 1.0 [[lys__L]][e]
 
* With common name(s):
 
* With common name(s):
** 1.0 2-Deoxy-D-ribose 5-phosphate[c] '''=>''' 1.0 Acetaldehyde[c] '''+''' 1.0 Glyceraldehyde 3-phosphate[c]
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** 1.0 L-Lysine[C-BOUNDARY] '''<=>''' 1.0 L-Lysine[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF0174]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
 
** '''26''' reactions found over '''69''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-import_from_medium]]
*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
*** [[l_plantarum_wcfs1]]
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*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
* EC Number : 4.1.2.4
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{{#set: direction=REVERSIBLE}}
* BioCyc : META:DEOXYRIBOSE-P-ALD-RXN
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{{#set: in pathway=}}
* MetaNetX (MNX) Equation : MNXR97787
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{{#set: reconstruction category=manual}}
* RHEA:
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{{#set: reconstruction source=manual-import_from_medium}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12821 12821]
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
* Reactome : REACT_R-BTA-6787321
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* KEGG Reaction : R01066
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Deoxyribose-phosphate aldolase}}
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{{#set: gene associated=EF0174}}
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{{#set: in pathway=map00030}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
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Revision as of 19:46, 18 March 2018

Reaction ExchangeSeed_lys__L

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Lysine[C-BOUNDARY] <=> 1.0 L-Lysine[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links