Difference between revisions of "ASNN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/nadph nadph] == * common name: ** Nicotinamide adenine dinucleotide phosphate - reduced * Syn...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URIK1 URIK1] == * direction: ** LEFT-TO-RIGHT * common name: ** Uridine kinase ATPUridine * Synon...")
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/nadph nadph] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/URIK1 URIK1] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Nicotinamide adenine dinucleotide phosphate - reduced
+
** Uridine kinase  ATPUridine
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[FLVR_1]]
+
* With identifiers:
* [[DPR]]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[uri]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[ump]][c] '''+''' 1.0 [[h]][c]
* [[MSAR]]
+
* With common name(s):
* [[DKGLCNR2y]]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Uridine[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 UMP C9H11N2O9P[c] '''+''' 1.0 H+[c]
* [[OPMEACPR]]
+
 
* [[MTHFR3]]
+
== Genes associated with this reaction  ==
* [[DHPTDNR]]
+
Genes have been associated with this reaction based on different elements listed below.
* [[G5SD]]
+
* [[EF0825]]
* [[EAR141y]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
* [[KAS2]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
* [[HPYRRy]]
+
== Pathways  ==
* [[CSPMDDH]]
+
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
* [[EAR180y]]
+
** '''82''' reactions found over '''244''' reactions in the full pathway
* [[DHDPRy]]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
* [[KAS17]]
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[2DGULRy]]
+
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
* [[FAS120]]
+
** '''22''' reactions found over '''72''' reactions in the full pathway
* [[EAR161y]]
+
== Reconstruction information  ==
* [[EAR120y]]
+
* [[orthology]]:
* [[P5CR]]
+
** [[pantograph]]:
* [[3OAR161]]
+
*** [[l_plantarum_wcfs1]]
* [[OGMEACPR]]
+
*** [[b_subtilis_subsp_subtilis_str168]]
* [[TRDR]]
+
* [[FAS140]]
+
* [[3OAR181]]
+
* [[3OAR121]]
+
* [[EAR60y]]
+
* [[ALR2]]
+
* [[EAR181y]]
+
* [[FAS100]]
+
* [[GAPDi_nadp]]
+
* [[3OAR141]]
+
* [[EPMEACPR]]
+
* [[HBUR1_manual]]
+
* [[KAS13]]
+
* [[EAR40y]]
+
* [[TDPDRR]]
+
* [[EAR140y]]
+
* [[GMPR]]
+
* [[FAS80_L]]
+
* [[DKGLCNR1]]
+
* [[UAPGR]]
+
* [[EAR160y]]
+
* [[2DGULRGy]]
+
* [[FMNRy]]
+
* [[EAR121y]]
+
* [[FLVR]]
+
* [[SACCD_c]]
+
* [[EGMEACPR]]
+
* [[GLYCLTDy]]
+
* [[EAR100y]]
+
* [[EAR80y]]
+
== Reaction(s) known to produce the compound ==
+
* [[SSALy]]
+
* [[ALDD2y]]
+
* [[ALDD3y]]
+
* [[GND]]
+
* [[ME2]]
+
* [[AASDH1_c]]
+
== Reaction(s) of unknown directionality ==
+
* [[G6PDH2r]]
+
* [[3OAR60]]
+
* [[DHFR]]
+
* [[DHFOR2]]
+
* [[3OAR80]]
+
* [[RBT5PDHy]]
+
* [[ASAD]]
+
* [[HMGCOAR]]
+
* [[3OAR40]]
+
* [[ALCD2y]]
+
* [[GLUDy]]
+
* [[SHK3Dr]]
+
* [[KARA1]]
+
* [[KARA2]]
+
* [[3OAR160]]
+
* [[DSERDHr]]
+
* [[GTHOr]]
+
* [[ATHRDHr]]
+
* [[3OAR180]]
+
* [[3OAR120]]
+
* [[ICDHyr]]
+
* [[3OAR100]]
+
* [[5DGLCNR]]
+
* [[3OAR140]]
+
* [[LSERDHr]]
+
* [[G3PD2]]
+
* [[HSDy]]
+
* [[MTHFD]]
+
* [[SACCD1]]
+
* [[ARABRr]]
+
 
== External links  ==
 
== External links  ==
{{#set: common name=Nicotinamide adenine dinucleotide phosphate - reduced}}
+
* RHEA:
{{#set: consumed by=FLVR_1|DPR|MSAR|DKGLCNR2y|OPMEACPR|MTHFR3|DHPTDNR|G5SD|EAR141y|KAS2|HPYRRy|CSPMDDH|EAR180y|DHDPRy|KAS17|2DGULRy|FAS120|EAR161y|EAR120y|P5CR|3OAR161|OGMEACPR|TRDR|FAS140|3OAR181|3OAR121|EAR60y|ALR2|EAR181y|FAS100|GAPDi_nadp|3OAR141|EPMEACPR|HBUR1_manual|KAS13|EAR40y|TDPDRR|EAR140y|GMPR|FAS80_L|DKGLCNR1|UAPGR|EAR160y|2DGULRGy|FMNRy|EAR121y|FLVR|SACCD_c|EGMEACPR|GLYCLTDy|EAR100y|EAR80y}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16825 16825]
{{#set: produced by=SSALy|ALDD2y|ALDD3y|GND|ME2|AASDH1_c}}
+
* BioCyc : META:URIDINEKIN-RXN
{{#set: consumed or produced by=G6PDH2r|3OAR60|DHFR|DHFOR2|3OAR80|RBT5PDHy|ASAD|HMGCOAR|3OAR40|ALCD2y|GLUDy|SHK3Dr|KARA1|KARA2|3OAR160|DSERDHr|GTHOr|ATHRDHr|3OAR180|3OAR120|ICDHyr|3OAR100|5DGLCNR|3OAR140|LSERDHr|G3PD2|HSDy|MTHFD|SACCD1|ARABRr}}
+
* MetaNetX (MNX) Equation : MNXR105162
 +
* KEGG Reaction : R00964
 +
* EC Number : 2.7.1.213
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Uridine kinase  ATPUridine }}
 +
{{#set: gene associated=EF0825}}
 +
{{#set: in pathway=map00240|map01100|map00983}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 16:41, 10 January 2018

Reaction URIK1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Uridine kinase ATPUridine
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Uridine[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 UMP C9H11N2O9P[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:URIDINEKIN-RXN
  • MetaNetX (MNX) Equation : MNXR105162
  • KEGG Reaction : R00964
  • EC Number : 2.7.1.213