Difference between revisions of "ASPTRS"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520] == * common_name: ** Amino sugar and nucleotide sugar metabolism * Synonym(s): ==...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ASPTRS ASPTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Aspartyl-tRNA synthetase * Synony...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ASPTRS ASPTRS] ==
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* common_name:
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* direction:
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** Amino sugar and nucleotide sugar metabolism
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** LEFT-TO-RIGHT
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* common name:
 +
** Aspartyl-tRNA synthetase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''24''' reaction(s) found
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* With identifiers:
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** [[UAGDP]]
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** 1.0 [[trnaasp]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[asp__L]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[amp]][c] '''+''' 1.0 [[asptrna]][c]
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** [[MAN6PI]]
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* With common name(s):
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** [[AMANAPEr]]
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** 1.0 TRNA(Asp)[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Aspartate[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 L-Aspartyl-tRNA(Asp)[c]
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** [[UAGCVT]]
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** [[HEX1]]
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== Genes associated with this reaction  ==
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** [[HEX7]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[GALKr]]
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* Gene: [[EF1970]]
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** [[ACM6PH]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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** [[PGMT]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** [[UDPGALM]]
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== Pathways  ==
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** [[PGI]]
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* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
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** [[PMANM]]
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** '''23''' reactions found over '''49''' reactions in the full pathway
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** [[UAPGR]]
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== Reconstruction information  ==
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** [[UAG2EMA]]
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* Category: [[orthology]]
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** [[GALT]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** [[G1PACT]]
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*** Tool: [[pantograph]]
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** [[G6PDA]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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** [[UDPG4E]]
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*** Tool: [[pantograph]]
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** [[UAG2E]]
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** [[AGDC]]
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** [[GALUi]]
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** [[G6PI]]
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** [[GF6PTA]]
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** [[PGAMT]]
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== Reaction(s) not found ==
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* '''56''' reaction(s) not found
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** [http://bigg.ucsd.edu/universal/reactions/GFUCS GFUCS]
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** [http://bigg.ucsd.edu/universal/reactions/UDPACGLP UDPACGLP]
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** [http://bigg.ucsd.edu/universal/reactions/PGIA PGIA]
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** [http://bigg.ucsd.edu/universal/reactions/UAG4Ei UAG4Ei]
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** [http://bigg.ucsd.edu/universal/reactions/ABFPT ABFPT]
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** [http://bigg.ucsd.edu/universal/reactions/G1PCTYT G1PCTYT]
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** [http://bigg.ucsd.edu/universal/reactions/MAN1PT MAN1PT]
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** [http://bigg.ucsd.edu/universal/reactions/G6PI3 G6PI3]
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** [http://bigg.ucsd.edu/universal/reactions/G6PI2 G6PI2]
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** [http://bigg.ucsd.edu/universal/reactions/AAPT AAPT]
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** [http://bigg.ucsd.edu/universal/reactions/GLPThi GLPThi]
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** [http://bigg.ucsd.edu/universal/reactions/FK FK]
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** [http://bigg.ucsd.edu/universal/reactions/G6PI_1 G6PI_1]
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** [http://bigg.ucsd.edu/universal/reactions/HEX4 HEX4]
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** [http://bigg.ucsd.edu/universal/reactions/UDPGLDCg UDPGLDCg]
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** [http://bigg.ucsd.edu/universal/reactions/AMANK AMANK]
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** [http://bigg.ucsd.edu/universal/reactions/AM6PTh AM6PTh]
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** [http://bigg.ucsd.edu/universal/reactions/UDPGLDC UDPGLDC]
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** [http://bigg.ucsd.edu/universal/reactions/ACNPLYS ACNPLYS]
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** [http://bigg.ucsd.edu/universal/reactions/UA4E UA4E]
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** [http://bigg.ucsd.edu/universal/reactions/UDPGD UDPGD]
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** [http://bigg.ucsd.edu/universal/reactions/UGE UGE]
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** [http://bigg.ucsd.edu/universal/reactions/ABFPTh ABFPTh]
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** [http://bigg.ucsd.edu/universal/reactions/GLUKA GLUKA]
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** [http://bigg.ucsd.edu/universal/reactions/GOFUCR GOFUCR]
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** [http://bigg.ucsd.edu/universal/reactions/MPAKI MPAKI]
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** [http://bigg.ucsd.edu/universal/reactions/PGCM PGCM]
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** [http://bigg.ucsd.edu/universal/reactions/UGLT UGLT]
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** [http://bigg.ucsd.edu/universal/reactions/PGIBh PGIBh]
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** [http://bigg.ucsd.edu/universal/reactions/SQD1 SQD1]
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** [http://bigg.ucsd.edu/universal/reactions/ACGAMPM ACGAMPM]
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** [http://bigg.ucsd.edu/universal/reactions/ACGAM2E ACGAM2E]
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** [http://bigg.ucsd.edu/universal/reactions/G6PIh G6PIh]
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** [http://bigg.ucsd.edu/universal/reactions/GF6PTA_1 GF6PTA_1]
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** [http://bigg.ucsd.edu/universal/reactions/PGMTh PGMTh]
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** [http://bigg.ucsd.edu/universal/reactions/UDPGALOR UDPGALOR]
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** [http://bigg.ucsd.edu/universal/reactions/ACNAMPH ACNAMPH]
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** [http://bigg.ucsd.edu/universal/reactions/F1PGT F1PGT]
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** [http://bigg.ucsd.edu/universal/reactions/UDPSQS UDPSQS]
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** [http://bigg.ucsd.edu/universal/reactions/ACGAMK ACGAMK]
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** [http://bigg.ucsd.edu/universal/reactions/AHEXASE3 AHEXASE3]
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** [http://bigg.ucsd.edu/universal/reactions/HEX10 HEX10]
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** [http://bigg.ucsd.edu/universal/reactions/PGIAh PGIAh]
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** [http://bigg.ucsd.edu/universal/reactions/GLGC GLGC]
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** [http://bigg.ucsd.edu/universal/reactions/CMPSASn CMPSASn]
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** [http://bigg.ucsd.edu/universal/reactions/ACGAM6PS ACGAM6PS]
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** [http://bigg.ucsd.edu/universal/reactions/ACNAM9PL ACNAM9PL]
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** [http://bigg.ucsd.edu/universal/reactions/ACNML ACNML]
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** [http://bigg.ucsd.edu/universal/reactions/MAN1PT2 MAN1PT2]
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** [http://bigg.ucsd.edu/universal/reactions/ACNMCT ACNMCT]
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** [http://bigg.ucsd.edu/universal/reactions/GALKh GALKh]
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** [http://bigg.ucsd.edu/universal/reactions/UACMAMO UACMAMO]
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** [http://bigg.ucsd.edu/universal/reactions/ULA4NFT ULA4NFT]
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** [http://bigg.ucsd.edu/universal/reactions/CDPGLC46DH CDPGLC46DH]
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** [http://bigg.ucsd.edu/universal/reactions/GLUKAh GLUKAh]
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** [http://bigg.ucsd.edu/universal/reactions/GMAND GMAND]
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== External links  ==
 
== External links  ==
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{{#set: common_name=Amino sugar and nucleotide sugar metabolism}}
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* MetaNetX (MNX) Equation : MNXR96101
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{{#set: reaction found=24}}
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* KEGG Reaction : R05577
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{{#set: reaction not found=56}}
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* EC Number : 6.1.1.12
 +
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Aspartyl-tRNA synthetase}}
 +
{{#set: gene associated=EF1970}}
 +
{{#set: in pathway=map00970}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:07, 21 March 2018

Reaction ASPTRS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Aspartyl-tRNA synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 TRNA(Asp)[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 L-Aspartate[c] => 1.0 Diphosphate[c] + 1.0 AMP C10H12N5O7P[c] + 1.0 L-Aspartyl-tRNA(Asp)[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR96101
  • KEGG Reaction : R05577
  • EC Number : 6.1.1.12




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