Difference between revisions of "CSPMDDH"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/23CN2P1 23CN2P1] == * direction: ** REVERSIBLE * common name: ** 2 3 cyclic nucleotide 2 phospho...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CSPMDDH CSPMDDH] == * direction: ** LEFT-TO-RIGHT * common name: ** Carboxyspermidine dehydrogenase...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/23CN2P1 23CN2P1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CSPMDDH CSPMDDH] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 2  3  cyclic nucleotide 2  phosphodiesterase  2  3  cyclc AMP
+
** Carboxyspermidine dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[23camp]][c] '''<=>''' 1.0 [[3amp]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[aspsa]][c] '''+''' 1.0 [[ptrc]][c] '''+''' 1.0 [[nadph]][c] '''=>''' 1.0 [[cspmd]][c] '''+''' 1.0 [[nadp]][c] '''+''' 1.0 [[h2o]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 2',3'-Cyclic AMP[c] '''<=>''' 1.0 3  AMP C10H12N5O7P[c] '''+''' 1.0 H+[c]
+
** 1.0 H+[c] '''+''' 1.0 L-Aspartate 4-semialdehyde[c] '''+''' 1.0 Putrescine[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''=>''' 1.0 Carboxyspermidine[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 H2O H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF0062]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
 +
** '''22''' reactions found over '''149''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27886 27886]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34111 34111]
−
* BioCyc : META:RXN-14113
+
* EC Number : 1.5.1.43
−
* MetaNetX (MNX) Equation : MNXR94722
+
* MetaNetX (MNX) Equation : MNXR96936
−
* KEGG Reaction : R03537
+
* KEGG Reaction : R09079
−
* EC Number : 3.1.4.16
+
* BioCyc : META:RXN-11566
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2  3  cyclic nucleotide 2  phosphodiesterase  2  3  cyclc AMP }}
+
{{#set: common name=Carboxyspermidine dehydrogenase}}
−
{{#set: gene associated=EF0062}}
+
{{#set: in pathway=map01100|map00330}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:39, 21 March 2018

Reaction CSPMDDH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Carboxyspermidine dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 L-Aspartate 4-semialdehyde[c] + 1.0 Putrescine[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] => 1.0 Carboxyspermidine[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c] + 1.0 H2O H2O[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 1.5.1.43
  • MetaNetX (MNX) Equation : MNXR96936
  • KEGG Reaction : R09079
  • BioCyc : META:RXN-11566




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